Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02320 ATGGCCACTTCATATAAAGCATTCCTATTGAATTGCTCCATTCAGAAAAGACCCTCCCATGTCTCTGACAAATCTTCTCACTTCAACCTTCCACCCTTCCCTGCCTTTAAGCCACTCAAGAAAATTCTGCCTGGAGTCCCTTTACAAATTGATGTTCAAAAGATTATCACAGACACTGCAGCTAAATTGCTTGACGCTTTCGTAGATTCATTCTTTGAATTTGTTGACCAACCACTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAGTTGGGTGAAGCCATACTTGTTACCAGCATCCAAGGACGAATTCCAGATGATTTTCCAGAGGGTGTCTATATTAGAAATGGACCAAATCCACTTTTTGGAGGGTTAAAATCAACAAACTCTATCTTTGGGAGGTCAAGTCACATTTGGGTGGAAGGAGAGGGAATGCTTCACGCAATTTATTTTAAAAGGTCAAGTGAAGGGAGGTGGAAGGTCCTTTACAACAACAAGCACGTTGAAACCGATACATACAAGATTGAAAAGCAACTCAGCAAACCATCGTTTCTACCGGCCATAGAAGGCGACTCACTCGCCATTTTGTCTGCTTATCTGCTAAACTGGTTGCGATTTGGCAAAGCAAACAAGTACATCAGCAACACCAATGTGTTTGAGCATTCTGGCAAGTTTTACTCGGTTGCCGAAAATCACATTCCTCAAGAGATTGATATCTTCACACTAAAAACTTTAAGAAATTGGGATGTCAATGGCGCCTGGGATCGTCCTTTTACCAGTCATCCAAAGAAGGCTCCAGATACGGGGGAGCTAGTCACATTAGGGGTTGCAGCAACCAAACCTTTTGCCGTTGCTGGGATTATTTCTGCTGATGGAGAGAAATTGGTTCGAAAAGTTGACCTCCAACTCAATAGGTCCACTCTTTGTCATGACATTGGTGTTACAAAGAGGTACAATGTGATCATGGATTTTCCTCTAACTATTGATCTAAACAGAGTTCTTAGAGGAGGACAATTAATAAAATACAATAAGGAGGAATACGCAAGGATTGGGATACTGCCACGCTATGGTGATGCCAACTCAATCAAATGGTTTGAGGTGGAACCTAATTGCACTTTTCACATTATCAACTCTTTTGAGGATGGGCACGAGGTTGTAGTGAGGGGTTGCAGATCTCTAGATTCACTAATTCCTGGACCTGTCCTAAGTTTGAAGGAATACGAGTGGTTATCTCGCTGTTACGAATGGCGATTGAATATGCACACTGGAGAAGTCAAGGAGAAAGATATCTGTGGAGCCAACGTAGTTTATATGGATTTTCCTGTGATCAATGGAAACTTCATAGGAGTGAGGAATAGATATGCATACACCCAAGTAGTCGATCCAATTGCAAGCTCTACTCAAGGTACATTATTGAAGATTTTCTTGTCTTTTTTTCCCCTCAAGAATTATAAATAG 1461 0.4168 MATSYKAFLLNCSIQKRPSHVSDKSSHFNLPPFPAFKPLKKILPGVPLQIDVQKIITDTAAKLLDAFVDSFFEFVDQPLLPSQSNFAPVEELGEAILVTSIQGRIPDDFPEGVYIRNGPNPLFGGLKSTNSIFGRSSHIWVEGEGMLHAIYFKRSSEGRWKVLYNNKHVETDTYKIEKQLSKPSFLPAIEGDSLAILSAYLLNWLRFGKANKYISNTNVFEHSGKFYSVAENHIPQEIDIFTLKTLRNWDVNGAWDRPFTSHPKKAPDTGELVTLGVAATKPFAVAGIISADGEKLVRKVDLQLNRSTLCHDIGVTKRYNVIMDFPLTIDLNRVLRGGQLIKYNKEEYARIGILPRYGDANSIKWFEVEPNCTFHIINSFEDGHEVVVRGCRSLDSLIPGPVLSLKEYEWLSRCYEWRLNMHTGEVKEKDICGANVVYMDFPVINGNFIGVRNRYAYTQVVDPIASSTQGTLLKIFLSFFPLKNYK* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02320 486 Pfam Retinal pigment epithelial membrane protein 87 474 IPR004294 GO:0016702
Phac9g02320 486 PANTHER BETA-CAROTENE DIOXYGENASE 94 477 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02320 Phac-Chr9 22062896 22068926 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02320 - - pvu:PHAVU_009G109200g 949.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02320 9 22062896 22068926 Phac9g02320 9 22062896 22068926 ECH