Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02298 ATGTTCTGTACTAGCACCTACACCCTTGACTACTGTATGGATGGTCAACTTGGTACAAATGGAGAGGAATCACATGACCATGAATCTGATGTTGGAGACTCTTCTTTAGTGCCCCGCTTACTGAAGAGGTTTGATGAATTGCACCCCGTCAATTCTTCATTGGGTGTGTCTGAAGCAGAAGCTAAAACATCACTGAAGATATGTGCTGTCAAAGCTGGAGGAATGATGTCTCTGGCTATTGATAACCGTGGGACCCTGTGGATGTGGGGAAACTGCCCACAACAAATCAAAGAAGGTGAGTTAGCCCTTGTAAGCAGTTTCACTCCAACTCCAGTTTGGGATTTTCAGGGGCGATCTGTTGTCAAGGTTGCATGTGGAAATGAGCATGTCGTAGTGCTGGTTAGTGCTGGGGAATCATACAATGGTGAAGATCTAGTATGCTACTCTTGGGGTTATAACACCCGTGGCCAATTAGGCTTGGGGGATTTAGAGAGCAGGCTGCATCCGGAAGTTGTTAAAACATTTGATGAGGAGTCATCACCCTATGAGGTGGCATGTGGTGCCTATCACACTGCTTTGCTCACTCGTATGAAGAAAACTAGTGATACATTAGACAGCACATGCTGGACCTTTGGCCTTGGAGACAATGGCCAGCTTGGGCATGGAACAACCCAAAGCACAATATTTCCTACACCTGTTAAAGAATTGCCACAAAATGTATCCCTTATTTGTGTTGACTGTGGTTTGTTTCATACAAGCGTAGTTTCCTCAGGTGGGGATGTGTGGTCATGGGGAATGGAGAAGGGTCTTGGCTTATGCCCTGATGCTAGTCGAGCTGGAACAGATTCTGGTGATGCACTGTCTCCCCGGCTTATGTCATGGAAGCCAAATCAACCTAAATTTCCAGATCCAGTTAAACTTGCATGTGGAGCCGCACATACTGTTATAATTGCGCAAGGGGGATATAGAATGTGGTCTTGGGGTAGGGGAAGAAGTGGAGTTCTTGGAGATGGCAAAGGCGAAGATTGTTACACTCCTACGCTCGTACTATGGCCTCAAATGATGGAGGATTCTGAGGAAGAGGAAGTAAAAAGCAATGGTGAGCAAGATAAGGCTAGAGAAGAAGAGACTGAAGCAACAACAGAAGCAGAAGAGAAACTATCCTCAGCATTGATTGAGCTGAAGCTGCTTCAAACAAAGCTATCTGTGATGAAAAAATATGTCAGTATACTTCATGGTTCTGTTTTTGGAAAGCCTTTTGAGGAGCAAGATATTCCCGATTCATTACTGAATTCAGGTTCACTTGACATTGGAAAAGAATGGGAGAAGATGTTAGGTGCAGCAGATCATAGGAAGCTAATTAGGTTGGAAATGTTTTACCGAGACATGCTTGCTGGAGTAAAAGACGAACTAATGAGGAGAAGGATCAAGGAAATTGTAAAGGAGTGTCTCCAATCTTCAGAGGTGTAA 1470 0.4449 MFCTSTYTLDYCMDGQLGTNGEESHDHESDVGDSSLVPRLLKRFDELHPVNSSLGVSEAEAKTSLKICAVKAGGMMSLAIDNRGTLWMWGNCPQQIKEGELALVSSFTPTPVWDFQGRSVVKVACGNEHVVVLVSAGESYNGEDLVCYSWGYNTRGQLGLGDLESRLHPEVVKTFDEESSPYEVACGAYHTALLTRMKKTSDTLDSTCWTFGLGDNGQLGHGTTQSTIFPTPVKELPQNVSLICVDCGLFHTSVVSSGGDVWSWGMEKGLGLCPDASRAGTDSGDALSPRLMSWKPNQPKFPDPVKLACGAAHTVIIAQGGYRMWSWGRGRSGVLGDGKGEDCYTPTLVLWPQMMEDSEEEEVKSNGEQDKAREEETEATTEAEEKLSSALIELKLLQTKLSVMKKYVSILHGSVFGKPFEEQDIPDSLLNSGSLDIGKEWEKMLGAADHRKLIRLEMFYRDMLAGVKDELMRRRIKEIVKECLQSSEV* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02298 489 Gene3D - 4 385 IPR009091 -
Phac9g02298 489 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 259 320 IPR000408 -
Phac9g02298 489 Pfam Regulator of chromosome condensation (RCC1) repeat 148 194 IPR000408 -
Phac9g02298 489 Pfam Regulator of chromosome condensation (RCC1) repeat 259 317 IPR000408 -
Phac9g02298 489 Pfam Regulator of chromosome condensation (RCC1) repeat 208 254 IPR000408 -
Phac9g02298 489 MobiDBLite consensus disorder prediction 356 384 - -
Phac9g02298 489 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 145 197 IPR000408 -
Phac9g02298 489 Coils Coil 355 375 - -
Phac9g02298 489 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 18 383 - -
Phac9g02298 489 MobiDBLite consensus disorder prediction 357 383 - -
Phac9g02298 489 SUPERFAMILY RCC1/BLIP-II 13 352 IPR009091 -
Phac9g02298 489 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 206 258 IPR000408 -
Phac9g02298 489 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 84 136 IPR000408 -
Phac9g02298 489 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 184 194 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02298 Phac-Chr9 21884235 21888504 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02298 - - gmx:100815199 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02298 9 21884235 21888504 Phac9g02298 9 21884235 21888504 ECH