Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02292 ATGGAATCCCATGCCTCCAATTCCATTTCTCATTCTAACCATAATAACAACAACAACAACCATCACCACCACCACCACCCTAGGTTCAAACCAAGCCAACCCATCTCGGACCGGATAGTCCGTGCCCTCCGCCACCGTCTCCGCCTCCTCCACCGTGCCGGCCCCACCTTCTTCATATTCGGTGCCACTGGTAACGTCTACACGGTCACCCTCTCCTCCACGCCCTCGTGCACCTGCCCTGACCGTACAACCCCATGCAAGCACATTCTCTTTGTTTTCATTCGAGTTTTGGGCGTGCCCCTTGATGACGTGTGTCTAAGGAGGAGGACCCTTCGACCCTGCCAGATCGAACGCCTCCTCGGCACGCCCACGTTGCCGGAGGCAGTGGCAGGCGGCACCCTCCGGCAGAGGTTCCACCAACTCTTCTTTGGCGGAGGGTCAACGAGGCCAAAGATAGAGACGGAGGAGGGTGCCACGTGCCCGGTTTGCCTTGAGGAAATGGGGAAGGAGCAAAACCTGGTTGCATGTGGGACATGCCGTAACCCTATTCATGAAGAGTGTTTGATGAGGTGGAAGAGAACAAGGGGAAGAAGAACGGCTAGTTGTGTGATTTGTAGAGCGAGGTGGAGGGACAGGGTGGAGCAGGATAAGTATCTGAACCTGTCTGCGTATGTTAGTGAAGATGACATGGGAGAACCAGCTGGGGGACTCTGCACTGGCTGA 723 0.5588 MESHASNSISHSNHNNNNNNHHHHHHPRFKPSQPISDRIVRALRHRLRLLHRAGPTFFIFGATGNVYTVTLSSTPSCTCPDRTTPCKHILFVFIRVLGVPLDDVCLRRRTLRPCQIERLLGTPTLPEAVAGGTLRQRFHQLFFGGGSTRPKIETEEGATCPVCLEEMGKEQNLVACGTCRNPIHEECLMRWKRTRGRRTASCVICRARWRDRVEQDKYLNLSAYVSEDDMGEPAGGLCTG* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02292 240 ProSiteProfiles Zinc finger RING-type profile. 160 206 IPR001841 -
Phac9g02292 240 Pfam Ring finger domain 159 206 IPR001841 -
Phac9g02292 240 MobiDBLite consensus disorder prediction 1 33 - -
Phac9g02292 240 SUPERFAMILY RING/U-box 151 213 - -
Phac9g02292 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 223 IPR013083 -
Phac9g02292 240 ProSiteProfiles Zinc finger SWIM-type profile. 67 97 IPR007527 GO:0008270
Phac9g02292 240 MobiDBLite consensus disorder prediction 1 16 - -
Phac9g02292 240 Pfam SWIM zinc finger 67 95 IPR007527 GO:0008270
Phac9g02292 240 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 17 215 IPR039903 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02292 Phac-Chr9 21874403 21878895 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02292 - - var:108321788 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02292 9 21874403 21878895 Phac9g02292 9 21874403 21878895 ECH