Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02190 ATGGCGAAAGTTTTCTGTGATTTTCGGTTCCTTCTTTTGGTTGCAGCTGGGGTCTTCATCTATATCCAGATGAGGCTTTTCGCTACACAATCAGGATATGCTGATCGCCTAGCTGCAGCTATTGAAGCTGAAAACCATTGTACAAGTCAAATGCGATCACTGATTGACCAGATTAGCTTGCAACAAGGACGAATTGTGGCCTTCGAAGAAGAGAGGAAACGTCTAGAACAAGAATGTGGACAAATGAAGTCTCTTGTACAAGATCTTGAAAGAAAAGACCTACAGAGGCTGACTGATAAAATGCAGGTTCCGGTGGCTGCTGTTGTGATCATTACATGTAATCGTGCTGATTACCTGGAGAGGACTATTAATTCTGTGTTAAAATACCAAAGGCCCATTTCTTCAAGATTCCCTTTATTTGTATCTCAGGATGGATCAGATCCAGATGTTAAAAGTAAGGCTTTGAGCTATGATCAGTTATCTTATATGCAGCACTTGGATTTTGAACCAGTTCAAACTGAACGACCAGGAGAGATAATTGCTTACTACAAAATTGCACGTCATTACAAGTGGGCTTTAGATGAGCTGTTCTACAAGCATAACTTCAGCCGAGTAATCATCCTTGAAGATGACATGGATATAGCACCTGATTTCTTTGATTATTTTGAAGCTGCAGCGACCCTCCTTGACAAGGATAAGTCTATTATGGCTGTTTCCTCATGGAATGATAATGGACAAAAGCAGTTTGTACATGATTCATATGAACTTTACCGTTCAGATTTCTTTCCTGGGTTAGGATGGATGCTGGTCAGATCTATATGGGATGAGTTATCACCAAAATGGCCTAAGGCTTACTGGGATGACTGGTTGAGACTAAAAGAAAATCACAAAGGACGACAGTTTATCCGACCCGAAGTGTGCAGAACATATAACTTTGGTGAGCATGGTTCTAGTTTTGGACTGTTTTTTAAGAAATATCTGGAGCCAATCAAGCTGAATGATGTCAAGGTTAACTGGAGATCAATGGATTTGAGCTATTTACTGGAGGATAAGTATTCTATGCATTTTGCCAACATTGTTAAGAAAGCTACACCTGTCTATGGAGCTGACATGGTTCTAAAGGCATATAATATAGATGGTGATGTGCGTATCAAATACAAAGATCAGTCAGACTTTGAAAACATTGCTCGCCAATTTGGTATATTTGAAGAGTGGAAGGATGGAGTACCGAGGACAGCCTATAAAGGAGTAGTCGTTTTCAGACATCAAACCTCACGACGTATATTCCTTGTTGGTCCAGAGTCTTTGAAGCTACTTCAGATCGAAGAGTCTTAA 1335 0.4015 MAKVFCDFRFLLLVAAGVFIYIQMRLFATQSGYADRLAAAIEAENHCTSQMRSLIDQISLQQGRIVAFEEERKRLEQECGQMKSLVQDLERKDLQRLTDKMQVPVAAVVIITCNRADYLERTINSVLKYQRPISSRFPLFVSQDGSDPDVKSKALSYDQLSYMQHLDFEPVQTERPGEIIAYYKIARHYKWALDELFYKHNFSRVIILEDDMDIAPDFFDYFEAAATLLDKDKSIMAVSSWNDNGQKQFVHDSYELYRSDFFPGLGWMLVRSIWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSFGLFFKKYLEPIKLNDVKVNWRSMDLSYLLEDKYSMHFANIVKKATPVYGADMVLKAYNIDGDVRIKYKDQSDFENIARQFGIFEEWKDGVPRTAYKGVVVFRHQTSRRIFLVGPESLKLLQIEES* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02190 444 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 104 327 IPR029044 -
Phac9g02190 444 Coils Coil 58 92 - -
Phac9g02190 444 FunFam Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase 366 439 - -
Phac9g02190 444 Pfam GNT-I family 15 441 IPR004139 GO:0006486|GO:0008375
Phac9g02190 444 CDD GT13_GLCNAC-TI 105 435 - -
Phac9g02190 444 Gene3D - 366 441 - -
Phac9g02190 444 PANTHER PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE 2 437 - -
Phac9g02190 444 FunFam Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase 104 327 - -
Phac9g02190 444 SUPERFAMILY Nucleotide-diphospho-sugar transferases 107 441 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02190 Phac-Chr9 20929218 20957404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02190 1 444 Glycosyltransferase AT4G38240 70.270 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02190 K00726 - gmx:100795005 847.425