Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02177 ATGGAGAACAGGGTAACATTACAGGAATGGTTTGACCGCGTTGACTCGGAGAAAAGTGGAAACATAACGGCGGTGCAGCTGAAGGAAGCTCTGGCTGTCGGCAACCTGCAATTCCCCCTCTCAGTGGTTCACCAGATGATCAGGATGTACGATTTCGACAGAAATGGTACCATGAACTTTCAAGAATTTGTTGCACTCAACAACTTCCTTCTTAAGGTTCAACATGCATTTTCGGATCTAGAGAGGGGTCGTGGTTTTCTTGTACCTGATGACGTATTTGAGGCTTTGGTAAAAATTGGTTTCAAGCTGGATTCTCCTGCTTTTTACTCTGTCTGTGAGAGCTTCGATCAAAGTAAAAATGGAAGGCTTCGGCTGGACGACTTCATATCAATATGTATATTTTTACAATCAGCACGGAATCTGTTTAATTCTTTTGATACAGCAAAACAAGGCAGAGTTACTCTCGATCTGAATCAGTTTGTGTATTGTAGTAAGTACACACTAAGCTGTCTTATATAA 519 0.4162 MENRVTLQEWFDRVDSEKSGNITAVQLKEALAVGNLQFPLSVVHQMIRMYDFDRNGTMNFQEFVALNNFLLKVQHAFSDLERGRGFLVPDDVFEALVKIGFKLDSPAFYSVCESFDQSKNGRLRLDDFISICIFLQSARNLFNSFDTAKQGRVTLDLNQFVYCSKYTLSCLI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02177 172 SUPERFAMILY EF-hand 2 163 IPR011992 -
Phac9g02177 172 ProSitePatterns EF-hand calcium-binding domain. 51 63 IPR018247 -
Phac9g02177 172 PANTHER PEFLIN 6 163 - -
Phac9g02177 172 Gene3D - 1 167 - -
Phac9g02177 172 Pfam EF-hand domain pair 19 66 IPR002048 GO:0005509
Phac9g02177 172 ProSiteProfiles EF-hand calcium-binding domain profile. 2 37 IPR002048 GO:0005509
Phac9g02177 172 ProSiteProfiles EF-hand calcium-binding domain profile. 38 73 IPR002048 GO:0005509
Phac9g02177 172 SMART efh_1 42 70 IPR002048 GO:0005509
Phac9g02177 172 SMART efh_1 6 34 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02177 7 131 EF-hand Containing Proteins AT5G04870 26.515 1.02e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02177 - - gmx:100792880 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02177 9 20869648 20873192 Phac9g02177 9 20869648 20873192 ECH