Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02157 ATGAAGAACACAACTTGTACTTCTATTTCAGTTGTGAAGGCCTCAACCAATGAACCATCTTCATCACCTCCATCCTCTGCTATTCTTCTCTTTCACAAACACAATGAGAATGGAGAACAAACCCTCGTGCCTCCCAACCCCAACCCCAACCTCGGCGATGGCTTCTATGAAATCGAAACCATACGCCGTAAGAGGGTACGCAAGGGTCAGCTCCAGTACCTAATAAAATGGCGTGGATGGCCTGAGACTGCCAACACCTGGGAGCCTCTTGAAAATCTACAGTCCGTTCCTGATCTTCTTCACGCTTTTGAGGACAGTCTCAAGTCAGGAAAAGTTCGCAAGCGCAAGCGCAAGCATGTTGTTCATCACACCAAGGTCAAGAATCACCCCCAACGTTCTACCACTTCTTACAGCCTTAGACATTTTCCAACTCACAACCCCCATTCTCAAACTCCCATCTTCCCTCACCAACCTCATCCTACCACCCTTCCTCAACCCCAACCAACCAATGTAAACGCCTTTCCAGAACACCACCAAAATGATTATGATCCAAAGCTCAGTGAACTTAAGGCAACAACAAACACTGCCCTTGAGCTAGATAACCTTGGAATACATTTCCGGCAACCTAAGGTTTCAACTGCCAATGGTGGTCACCTGGATTGCGCCGAACCAACTCAAACTGGGTGCTGTAGAGGAGCAAAAAGGAGAAAATCTGGTTCCGTCAAGAGCTTCAAGAGAGAGACAGATGCAGGGAAGCCTGTTGATTCTCAGAATGCAGTCAGCTTGCCTGTTGGTGCAGTTGAACCAGGCTGCACGAGAACCGCTGGTTGTGTGGGGAATGATAGTCCTATGAAGATGGATGATGCTAAAAGTGCCTGCAATATTGTCAAGATTTTGAAGCCAATAGGTTATTCATCTTCTTTATCCGACAATATGCAGGATGTTTTAGTGACATTTATGGCCATGAGGTCTGATGGAACAGAAGTGATGGTGAATAACAGATATCTCAAGGCATACAATCCACTTCTGCTGATTAATTTCTATGAGTTGCATCTCCGGTATAGTCCTACATTGTAA 1077 0.4587 MKNTTCTSISVVKASTNEPSSSPPSSAILLFHKHNENGEQTLVPPNPNPNLGDGFYEIETIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSVPDLLHAFEDSLKSGKVRKRKRKHVVHHTKVKNHPQRSTTSYSLRHFPTHNPHSQTPIFPHQPHPTTLPQPQPTNVNAFPEHHQNDYDPKLSELKATTNTALELDNLGIHFRQPKVSTANGGHLDCAEPTQTGCCRGAKRRKSGSVKSFKRETDAGKPVDSQNAVSLPVGAVEPGCTRTAGCVGNDSPMKMDDAKSACNIVKILKPIGYSSSLSDNMQDVLVTFMAMRSDGTEVMVNNRYLKAYNPLLLINFYELHLRYSPTL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02157 358 ProSiteProfiles Chromo and chromo shadow domain profile. 56 115 IPR000953 -
Phac9g02157 358 SMART chromo_7 55 108 IPR000953 -
Phac9g02157 358 ProSitePatterns Chromo domain signature. 73 93 IPR023779 -
Phac9g02157 358 Gene3D - 31 108 - -
Phac9g02157 358 Pfam Chromo (CHRromatin Organisation MOdifier) domain 56 105 IPR023780 -
Phac9g02157 358 CDD CD_CSD 56 105 - -
Phac9g02157 358 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 41 357 IPR044251 GO:0006325|GO:0031507
Phac9g02157 358 SMART ChS_2 284 357 IPR008251 GO:0005634
Phac9g02157 358 MobiDBLite consensus disorder prediction 231 257 - -
Phac9g02157 358 MobiDBLite consensus disorder prediction 111 129 - -
Phac9g02157 358 PRINTS Chromodomain signature 66 80 IPR017984 -
Phac9g02157 358 PRINTS Chromodomain signature 53 61 IPR017984 -
Phac9g02157 358 PRINTS Chromodomain signature 81 93 IPR017984 -
Phac9g02157 358 MobiDBLite consensus disorder prediction 110 135 - -
Phac9g02157 358 SUPERFAMILY Chromo domain-like 39 112 IPR016197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02157 Phac-Chr9 20419285 20426200 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02157 - - vun:114164029 587.8