Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02086 ATGGAGAGTAAGTCAGGGAGCAGCAAGCGGAAAAATGGTGCAAAGGGAGAGATTGTGGATGGTTCCAAGATTATGGAGTTGGTTGGAAACGAACAAGTTTTCAGCGACTTTGTGGACAATAAGTTTGACGAGTTGGATAAGGACAGAGATGGAAAACTCTCCATGAAGGAGCTTGAACCTGCTGTTGCTGACATCGGTGCTGGCCTTGGTTTGCCTGCTCAAGGCACTAGTCCGGATTCAGATCACATCTATTTTGAGGTCTTGAATGAGTTCACCCATGGTAAGCAAGAAAAAGTAAGCAAGATGGAGTTCAAAGAGGTTCTCTCAGACATTCTTTTGGGCATGGCTGCTGGACTAAAGCAAGACCCTATTGTTATACTCCGCATGGAAGGGGAAGATCTCCTTGAGTTTGTTAATGGTCCAAGTTATGAAGCAGAAATGGCATCCATTTTATCTCAGATTGAGTCCCCTAATGGATCACTTCGTGACCAAGTAATTGAAGCTTTTGGGAGACTCACTGTCGATCAAGGAATTCCTCCCACATCAGATTCTTGGGTTTTCAACAACATTGTGGATCCAGCACTGTCTCAAGCTGGGCCTGCTTTGGACAAACCTGCTGCTCAGGAGACATTTTTGGAAGAATTTAAGAAAGTGGCATTAAGTGTGGTTGATTTTCTTAAAGAGAAACCTGTCATTGTTGCCCACAGTGAAAACACATTTGATGGACGCGGCGTTAAGAGACTTTTATCCAACAAGTTTGAACTAGACAGGACATTGAACTTGGCTTTAGAGAATCTGCCAAAAGATCGCAATGGAAAAATATCAAAGGACTATCTGCGGCTGGCACTAGATCTGGTGTCTCCATCTGCTGGTTTACCTCCAGTTGGTGCAATTGAAGAGATGGATAAAGTTATTGTTGAAGCCTTTAAGATGGTGAATGTCGATGACACAAACACGGTTAGAGAAGAAGAATTCAAGAAAATTTTAACTGAAATATTGGGGGATATCATGTTGCAGTTAGAGGGCAATCCCATATCTGTTTCTTCAAATTCAGTCGTACATGAGCCTTTAGGCTCATCTTCTACACTCTTGCAGCCATCTCCAAGTGAAACAGCATAG 1119 0.429 MESKSGSSKRKNGAKGEIVDGSKIMELVGNEQVFSDFVDNKFDELDKDRDGKLSMKELEPAVADIGAGLGLPAQGTSPDSDHIYFEVLNEFTHGKQEKVSKMEFKEVLSDILLGMAAGLKQDPIVILRMEGEDLLEFVNGPSYEAEMASILSQIESPNGSLRDQVIEAFGRLTVDQGIPPTSDSWVFNNIVDPALSQAGPALDKPAAQETFLEEFKKVALSVVDFLKEKPVIVAHSENTFDGRGVKRLLSNKFELDRTLNLALENLPKDRNGKISKDYLRLALDLVSPSAGLPPVGAIEEMDKVIVEAFKMVNVDDTNTVREEEFKKILTEILGDIMLQLEGNPISVSSNSVVHEPLGSSSTLLQPSPSETA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02086 372 SUPERFAMILY EF-hand 41 342 IPR011992 -
Phac9g02086 372 ProSiteProfiles EF-hand calcium-binding domain profile. 33 68 IPR002048 GO:0005509
Phac9g02086 372 ProSiteProfiles EF-hand calcium-binding domain profile. 300 335 IPR002048 GO:0005509
Phac9g02086 372 ProSitePatterns EF-hand calcium-binding domain. 46 58 IPR018247 -
Phac9g02086 372 Gene3D - 11 120 - -
Phac9g02086 372 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 129 352 - -
Phac9g02086 372 SMART efh_1 37 65 IPR002048 GO:0005509
Phac9g02086 372 SMART efh_1 258 286 IPR002048 GO:0005509
Phac9g02086 372 SMART efh_1 304 332 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02086 Phac-Chr9 19603677 19607823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02086 1 371 EF-hand Containing Proteins AT4G38810 63.467 4.32e-168 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02086 - - gmx:100787083 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02086 9 19603677 19607823 Phac9g02086 9 19603677 19607823 ECH