Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01883 ATGGGCGAGGTATCTGAAACGATGACGAAGAAGAAGAAGAAGGGACGCCCCTCTCTTTTGGATCTTCAAAAGCGATCTCTCAAGAAGGAACAGCAACAGGGCCAACACCACAACCAGCGACAGAACAACCCCAATTCCACCAATTCACACCCCAAAAACAACAACGTTGCTACCCACGACGACGACGACGACGAGCGCAAGGAGAAGAAGCACAAGCTCCTCGTCGGACTCAATTCCCATCTCCACAACCCAACATTATTCCCCAATTCCCAGCCATTCAATTCCGATCCCAAGAGGCGCAAGATTGACCCTCTCCAACACCACCAAACGGATGGGAAGGTTCCGAAAGCGACTGACAGTAAACATGGTTCGCAGGGGGAGTCCGGTCCCACTACACCTTTGCCAGACAAAAAGCTCTTGCTGTTTATCCTTGACAGACTTCAAAAGAAGGACACGCACGGGGTGTTCTCTGAGCCTGTGGATCCAGAAGAGCTTCCTGATTATCATGACATCATCAAAAACCCGATGGATTTTGGAACTGTGAGAAAGAAATTGGATGGGGAACTATATACCGACTTGGAACATTTTGAGAAAGATGTGTTCTTGATTTGCTCTAATGCAATGCAATATAATTCATCAGATACCATTTACCACCGACAGGCCCGAGCCATGCAAGAGATCGCAAGGAAGGACTTTGAGAATCTGAGACAAGATAGTGATGATAGTGAACCACAGCCCAAAGTTGTGCAGAGAGGAAGGCCACCAGGCAAGCTCTCAAGAAAGTCACTGGGTATGCCTCCTGCTGAGCGCGTTGGTCCTGAATCTTCTTCTGATGCAACTCTTGCTTCTGGCGGGGATATTGGTAGTGGCTCCAACGGTTATAATCTTAGGAAAGTACCAAGCAAATTTCAGCCTGCAGATTCATCTGCTAGGGCCTACAACAGCACTTTTAACAGTGGAGGGTATACGGGTTGGTCCGAATGGGAGAATGAATTTCCAGCTTCTGTTGTAAAAGCTGTGTTAAGATATGGAAAGAAGCAGTATACAGTTGATGAGACCAGGCGCGATTCTTACAAAATACCAGTGACTTTAGGAAATAACGAAGGACCGCTGTTGACCACAGTTGAAGATGAAGTCAAGCAACTTCTTGCTGTAGGTATACACATGAAGCACAGTTATGCAAGAAGTCTAGCCCATTTTGCTGCAGATCTTGGTCCTGTTGTTTGGAAGATTGCTGCAAGTAAAATAAGCAGTGTTTTGCCTACAGGACATGAATTTGGTCCTGGATGGGTAAGTGAAGATGACGGGTCACAGAAGCAACACTTCCCAGTTTGTGACGAGGGTAGAACTTCAGACCCTCCTGTGGTAGAGGATTGTAGAAGTAGATTTTCTTCTCCATCTGGATCACTTCCCCTTGCAAATAGACCCTGCTTGCAAAGTGGAGACATGGTTATAAATAATTACCAGAAAGAGTTGAATCCGGCAACCAACATTGGTGATGGATCTGAGTCCATAACTCCTGTGAGGATTCAGCAGGAATCCGTGCCGCACTCTGATGATTTTGGTTCACATGATTGGTTAGGTTCTAATTTTTCACCACAAATGAAGATGGTAAGACTTGCTGACCTAACTGGGTCTCCGAGTGCTGGGGTTGCTCCTCAAATGTTTGACATGGATCCCACAAGCAGCCGCATTGCGCAGACAAATATGAATCCTTCTCTTATGGGACAATACGGGAGCAAATCAAGTCAATTAGAAACCGGTAATTTATTGGCCCGGGAATCTGGGTTTGAGCCACGAAGTTGGTCTCAAGGGATTGCTGGGAAATCATCTTGGCCGGGTTTGGAAGTTCCCACTAAACAGAATTCTTTTGCACATTCTAATGACTTGAATGGAAGGATTGGAACTACAAATTCACCTAGTAGTTCCAACGTGGAGGCTGGTTCTCAGTTGCAGCCCAATTTGGCATTACAGCTCTGA 1980 0.4621 MGEVSETMTKKKKKGRPSLLDLQKRSLKKEQQQGQHHNQRQNNPNSTNSHPKNNNVATHDDDDDERKEKKHKLLVGLNSHLHNPTLFPNSQPFNSDPKRRKIDPLQHHQTDGKVPKATDSKHGSQGESGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDPEELPDYHDIIKNPMDFGTVRKKLDGELYTDLEHFEKDVFLICSNAMQYNSSDTIYHRQARAMQEIARKDFENLRQDSDDSEPQPKVVQRGRPPGKLSRKSLGMPPAERVGPESSSDATLASGGDIGSGSNGYNLRKVPSKFQPADSSARAYNSTFNSGGYTGWSEWENEFPASVVKAVLRYGKKQYTVDETRRDSYKIPVTLGNNEGPLLTTVEDEVKQLLAVGIHMKHSYARSLAHFAADLGPVVWKIAASKISSVLPTGHEFGPGWVSEDDGSQKQHFPVCDEGRTSDPPVVEDCRSRFSSPSGSLPLANRPCLQSGDMVINNYQKELNPATNIGDGSESITPVRIQQESVPHSDDFGSHDWLGSNFSPQMKMVRLADLTGSPSAGVAPQMFDMDPTSSRIAQTNMNPSLMGQYGSKSSQLETGNLLARESGFEPRSWSQGIAGKSSWPGLEVPTKQNSFAHSNDLNGRIGTTNSPSSSNVEAGSQLQPNLALQL* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01883 659 MobiDBLite consensus disorder prediction 36 54 - -
Phac9g01883 659 Pfam Bromodomain 143 222 IPR001487 GO:0005515
Phac9g01883 659 SMART bromo_6 129 237 IPR001487 GO:0005515
Phac9g01883 659 MobiDBLite consensus disorder prediction 55 75 - -
Phac9g01883 659 MobiDBLite consensus disorder prediction 599 659 - -
Phac9g01883 659 Gene3D - 134 251 IPR036427 GO:0005515
Phac9g01883 659 MobiDBLite consensus disorder prediction 235 309 - -
Phac9g01883 659 MobiDBLite consensus disorder prediction 1 135 - -
Phac9g01883 659 PANTHER BROMODOMAIN CONTAINING PROTEIN 8 658 - -
Phac9g01883 659 MobiDBLite consensus disorder prediction 96 120 - -
Phac9g01883 659 ProSiteProfiles Bromodomain profile. 148 218 IPR001487 GO:0005515
Phac9g01883 659 MobiDBLite consensus disorder prediction 615 659 - -
Phac9g01883 659 ProSitePatterns Bromodomain signature. 153 210 IPR018359 -
Phac9g01883 659 SUPERFAMILY Bromodomain 118 240 IPR036427 GO:0005515
Phac9g01883 659 PRINTS Bromodomain signature 199 218 IPR001487 GO:0005515
Phac9g01883 659 PRINTS Bromodomain signature 165 181 IPR001487 GO:0005515
Phac9g01883 659 PRINTS Bromodomain signature 181 199 IPR001487 GO:0005515
Phac9g01883 659 PRINTS Bromodomain signature 151 164 IPR001487 GO:0005515
Phac9g01883 659 CDD Bromodomain 136 232 - -
Phac9g01883 659 MobiDBLite consensus disorder prediction 276 298 - -
Phac9g01883 659 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01883 Phac-Chr9 17807447 17812212 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01883 K22184 - gmx:100811115 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01883 9 17807447 17812212 Phac9g01883 9 17807447 17812212 ECH