Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01643 ATGGGTGCAGAGTCACAAATTCCACGAAGCTTAATCCACAGAATCTACGCTCCCTTGGCTAACGAATTTCATTTTGCACCACCGCTCTCTTCCTCCAGAACAAATGAATTCGAACTTGTTCGAGGTGTTCTACGAATGCTGCAAGGGTTTTCTGGTCCCCTGTTCTCTTGGGATAAAAGTGCAAAAAGTTTCTGTGCGAAGACCGGAGTTTACGTCAGCCATCTCTCACAGAAAAGTCTACACTCTCTTCTCAACCAGTTTATCCACGCAGCTACGTGTCTCCAATTCGTGGCGATTACACTCGGTAAAGTTGAATCTGCAGTGCCAAAGTCTCCCCCTACTTTGAACGCGTTTGCGTCCTCTGCTTCAGCGTGCCTTAAGCGGTTACGGAATCTTGCCTTGAAGGAGGAAACGTTCTTGAGTAATGCAGATGGAATAACCACTCCAACCTTGTTAGGATTGACCAATTCTTTATCGAGTCTTTGCTCAGGGGCTGAATTTCTATTTCAAGTAGTGCATGAGGCCATTCCTGCTGTATATTTTGAGTTTGGTGTGTCTGTACCAGCAGCAGAACTCACTGTTCACGTGCTTGACTACCTTCATAAGAAGCTTGATGAAATGTGTCTGGTACAAGGTGGTGAGGAGGAAGCTAACCAGATGGTTCTTTATATGTACGTTGGAAGCTTGTTGCCGTATATTGAGGGTCTTGATTCCTGGCTTTTTGAAGGAATTCTTGATGATCCTTTTGGTGAGATGTTCTTTTTCACTAATAAAGAAGTCTCAGTTGACGAGGCCGAGTTCTGGGAGAAGAGTTATTTATTAGGAACACTACAGCATAGCAAGTTAGGTTCAGACTTTTCTTCCACAGATTATGGCAATGATTCTGTCCCAGCATCAAATGACAAGGAAATGGACAGGAGGGATTCCATTTCTTTGTCTGGCACAACTAAAGGAAAAGAACCAAACATTAGAGACCGTCCAGCTTGTCCTCTTTTTATTAACGATTTAGCTAAATCAATAGTTTCTGCTGGAAAATCTTTGCAGCTTATGCGCTATGTACCTAATTCCTCAGTGAATTGTAGCAAAGAAAGTAATTATGAGGTTGGAAGTACCAAATGTTTTAACTATGGTTTATATCCTACTCAGAGAATGGCTGGGCTAACCTTGCCGGAAGTTTTTTCTGTATCACTAGTTGGACTTATTGGTCACGGTGACCATGTCTGTAAGTACTTCCGGCAAGAGAACTGGTATGATATTGTAACTGTTTCTTCCTATGCATCTTGTGTAAATGAGGAAAAAATAGATAATGACAATAATGAAAAATTAATTGCTCCACCTTATTCAGAGAAGACTTGGTATAAGTTCTTGATTGATACATTATTTCAGAAAAGATCAGCTGACTTAAAGCTAACATATGAACACATAAATAATGACACATTAGAGCTGAGAGGGGCTAATGTTATTGAAGATGAAGTGCTTCTCTTGAGGTCATACGTGGAAAATCCAGTTATTACAGTATGTCGAACAAACCTTGGAAAGAATGGGAATGCCTTGAAAGCATTGAATTTATCTCAAAAATTCAGCTTGCCTTCATTAAATGATGAGAGTTTAAGAAGAGCTATATTTGGTGCAGAAAGTCCTGGATTTTCTGATAGTGAAGGAACAAACTATACATTTGGCTTTCACTTTGGTGAATCTGAATACCTTCGCTCACAGGATGACAGAAAGCTTTTAGAAATGTTATTTCCTTTTCCCACTATTTTACCTTCATTTCAGGATGATGTTCCTGTGTCGGAGCTCTTACCTTTCCAGAGAAACAGTAGTCTTATTTCAAGAGTTCTTCGATGGATGCAAAATGTTGACCTAAGAACTGCTCCACTTCCTCTAGTTATTATGCAGTACTGTCTAACCGTCTACATTCAGAAACAGGTGGATTATATCGGAGTGAATATGCTGTTAAAGTTGATGAATGAATGGAGATTGATGGAGGAGCTTGCAGTGTTGAGAGCTATTTACTTGCTAGGTTCAGGTGATTTGCTGCAACACTTTTTGACTGTAATTTTCAATAAGTTAGATAAGGGTGAAGCATGGGATGATGATTTTGAATTAAACACAATATTGCAGGAATCGATCAGAAATTCTTCTGATTGTATGCTGTTAAGTGCTCCAGATTCATTGGTAGTGACGATAACCAAAAACCGTGTTCACAGTGATGAGGAAGCTAGCACAGCTGGTGCTGTTTTGAGCACTCTTCGTCAAAGTCAGGTCAATAGCTTTGGAATTAATGGCCTTGATATGCTCAAGTTCACGTATAAGGTCCCTTGGCCTCTTGAACTTATTGCAAATACAGAGGCAATTAAGAAGTACAACCAGGTGATGAGGTTCTTGTTGAAGGTCAAGCGTGCAAAATTTGTATTGGATAAAGTGCGGAGATGTATGTGGAAGGGTAGGGGTTCAGCTACAAACTTCAGAAAGCATCATTTGTTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATGTGATGGATCGGGTATATCACAGTGCATGGCGTGAACTATGTGAAGGTATGACTGCAGCAAAATCTCTGGATGAAGTCATTGAAGTCCATGAGGCTTACATGTTATCAATTCAACGGCAATGCTTTGTGGTTCCTGATAAGCTGGGGGCTCTTATTGCCAGCCGCATCAACAGCATCCTTGGCATAGCTTTAGACTTTTATAACATACAGCAAACATTAAGTAGCGGTGGAGCTGTTTCTGCCATCAAAGCAAGGTGTGAGATGGAAGTGGACCGGATAGAGAAACAATTTGATGATTGCATTGCTTTCTTACTTCGGGTTTTGTCATTCAAATTAAATGTCGGGCACTTCCCTCATCTGGCTGATTTGGTGACCAGAATCAACTACAACTATTTCTACATGTCTGCTAATGGAAATTTGATGACTGCCTCCAGTTCTGGAAGTGTTACTTCAAGGTTGGCGAAGCCCCCTGGGTAG 3009 0.4078 MGAESQIPRSLIHRIYAPLANEFHFAPPLSSSRTNEFELVRGVLRMLQGFSGPLFSWDKSAKSFCAKTGVYVSHLSQKSLHSLLNQFIHAATCLQFVAITLGKVESAVPKSPPTLNAFASSASACLKRLRNLALKEETFLSNADGITTPTLLGLTNSLSSLCSGAEFLFQVVHEAIPAVYFEFGVSVPAAELTVHVLDYLHKKLDEMCLVQGGEEEANQMVLYMYVGSLLPYIEGLDSWLFEGILDDPFGEMFFFTNKEVSVDEAEFWEKSYLLGTLQHSKLGSDFSSTDYGNDSVPASNDKEMDRRDSISLSGTTKGKEPNIRDRPACPLFINDLAKSIVSAGKSLQLMRYVPNSSVNCSKESNYEVGSTKCFNYGLYPTQRMAGLTLPEVFSVSLVGLIGHGDHVCKYFRQENWYDIVTVSSYASCVNEEKIDNDNNEKLIAPPYSEKTWYKFLIDTLFQKRSADLKLTYEHINNDTLELRGANVIEDEVLLLRSYVENPVITVCRTNLGKNGNALKALNLSQKFSLPSLNDESLRRAIFGAESPGFSDSEGTNYTFGFHFGESEYLRSQDDRKLLEMLFPFPTILPSFQDDVPVSELLPFQRNSSLISRVLRWMQNVDLRTAPLPLVIMQYCLTVYIQKQVDYIGVNMLLKLMNEWRLMEELAVLRAIYLLGSGDLLQHFLTVIFNKLDKGEAWDDDFELNTILQESIRNSSDCMLLSAPDSLVVTITKNRVHSDEEASTAGAVLSTLRQSQVNSFGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRCMWKGRGSATNFRKHHLLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMTAAKSLDEVIEVHEAYMLSIQRQCFVVPDKLGALIASRINSILGIALDFYNIQQTLSSGGAVSAIKARCEMEVDRIEKQFDDCIAFLLRVLSFKLNVGHFPHLADLVTRINYNYFYMSANGNLMTASSSGSVTSRLAKPPG* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01643 1002 Pfam Gamma tubulin complex component C-terminal 661 977 IPR040457 GO:0043015
Phac9g01643 1002 FunFam Gamma-tubulin complex component 661 976 - -
Phac9g01643 1002 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 31 977 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Phac9g01643 1002 MobiDBLite consensus disorder prediction 299 320 - -
Phac9g01643 1002 MobiDBLite consensus disorder prediction 293 320 - -
Phac9g01643 1002 Gene3D - 661 976 IPR042241 -
Phac9g01643 1002 Pfam Gamma tubulin complex component N-terminal 40 365 IPR041470 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01643 2 708 Glycosyltransferase AT1G20570 49.239 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01643 K16572 - gmx:100782299 1768.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01643 9 13482280 13491315 Phac9g01643 9 13482280 13491315 ECH