Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01387 ATGGACTCTCTACAACTCCATGCTCTTCTAAATCTGCATCCATGCGCATCATCACCATCACTAAGGCAACTGTGTTTCCCTCTTCCGTTAATACGAAATTCTAGAAATCGCAACTTCCGATTGTTTTCTGCTCACAATGGCGGCGCTGCTTCGCAAGACGGTCCCTTCGCTTTTGAAGAAAAAGTTGTCTCTTCCCCCAAAGATGATAGAGGTCTCGTGCTGGCCAGAGAAACCGACGATTTTGGTTATCTCGTTGGCTTTCGCTTGATTCCGGAGTCAGGTCTTGAAGAGTTGATGAGTGTGCAACATGCAATAGCTGTGGAAGACTCTAGTAGCGACGAGGCTAAAAAACCTGGGATTAAGGATACAGGTGAAGAGGAAGCTCAGACTAGAGTGTCCTACAACATTATTTTTGTGACTGCTGAAGCTGCGCCATATTCCAAGACAGGTGGTCTTGCTGATGTTTGTGGCTCTTTGCCAATTGCTCTGGCGGCTCGCGGGCACCGTGTGATGGTTGTCACGCCCAGATACATTCATGGTACTTCTGAGGATGCTAAGTTTGCTGGGGCAGTTGATCTGGGGCAACGCACCAAAGTGTCGTGCTTTGGAGATGCTCAAGAAGTTGGCTTTTTCCATGAGTATAGGGAAGGGGTTGATTGGGTGTTTGTGGATCACCCCTCGTTCCATAGGCCAGGGAATCCGTATGGAGACAAGTTTGGGACTTTTGGGGATAATCAGTTTCGGTTCACTTTACTTTCCCATGCAGCGTGTGAAGCGCCATTGGTGCTTCCATTGGGGGGTTTCACTTACGGAGAAAAATGTTTATTCCTTGCTAATGATTGGCATGCCAGCCTAGTTCCAGTACTTTTGGCAGCGAAGTATCGTCCACATGGGGTATATAGGGATGCTCGCAGTATATTAGTGATACATAATATAGCACATCAGGGAGTGGAACCTGCAATTACATACAGTAGTTTGGGGTTGCCTACAGAATGGTATGGAGCACTGGAATGGGTGTTCCCTACGTGGGCAAGGACGCATGCTCTTGACACAGGTGAAGCTGTCAACTTTCTAAAAGGTGCTGTTGTTACAGCTGACCGGATTGTGACAGTAAGCAAGGGGTATTCCTGGGAGATAACTACAAGTGAAGGTGGAAATGGTCTACATGAATTATTAAATGGTCGAAAAAGTATTCTCAATGGGATCACAAATGGAATTGACGTCACTGAATGGGACCCATCATGTGATAAACATATTGCTTTCAACTACTCTGCTGATGACCTTTCCGGGAAGGCCAAATGCAAGTATGCTTTGCAGCAGGAGTTGGGTCTTCCAGTGAGGCCTGATTGTCCATTGATTGGGTTCATTGGAAGACTGGACTACCAGAAAGGTATTGACTTGATCCGCTTGGCAATGCCAGAGCTCATGGAAGCGGATGTTCAGTTTGTAATGCTTGGGTCAGGAAACCCTATTTATGAAGACTGGATGAGAGCAACAGAGTCCGTTTATAGAGATAAATTTCGGGGTTGGGTGGGATTTAATGTTCCAATATCTCATAAAATAACTGCAGGCTGTGATATATTGTTGATGCCATCTGCGTTCGAGCCCTGTGGACTGAATCAGTTGTATGCAATGAGATATGGAACTATACCCGTAGTTCATGAAACTGGGGGCCTAAGAGATACTGTTCATAATTTTAGTCCATATACTGAAGACAGCAAAGCTGAAAGCACTGGGTGGACGTTTTCTCCACTAACAAAAGAGAGCATGTTAACGGCTCTAAGATATGCCATTCAGACATACAATGAACACAAGTCTTCGTGGGAGGGATTGATGCTCAGAGGCATGAAAAAAGATTACACATGGGTAAATGCAGCTACTCAATACGAGCAAATCATTGAGTGGGCATTCATCGACCCACCCTATTGCTGA 1932 0.4565 MDSLQLHALLNLHPCASSPSLRQLCFPLPLIRNSRNRNFRLFSAHNGGAASQDGPFAFEEKVVSSPKDDRGLVLARETDDFGYLVGFRLIPESGLEELMSVQHAIAVEDSSSDEAKKPGIKDTGEEEAQTRVSYNIIFVTAEAAPYSKTGGLADVCGSLPIALAARGHRVMVVTPRYIHGTSEDAKFAGAVDLGQRTKVSCFGDAQEVGFFHEYREGVDWVFVDHPSFHRPGNPYGDKFGTFGDNQFRFTLLSHAACEAPLVLPLGGFTYGEKCLFLANDWHASLVPVLLAAKYRPHGVYRDARSILVIHNIAHQGVEPAITYSSLGLPTEWYGALEWVFPTWARTHALDTGEAVNFLKGAVVTADRIVTVSKGYSWEITTSEGGNGLHELLNGRKSILNGITNGIDVTEWDPSCDKHIAFNYSADDLSGKAKCKYALQQELGLPVRPDCPLIGFIGRLDYQKGIDLIRLAMPELMEADVQFVMLGSGNPIYEDWMRATESVYRDKFRGWVGFNVPISHKITAGCDILLMPSAFEPCGLNQLYAMRYGTIPVVHETGGLRDTVHNFSPYTEDSKAESTGWTFSPLTKESMLTALRYAIQTYNEHKSSWEGLMLRGMKKDYTWVNAATQYEQIIEWAFIDPPYC* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01387 643 Gene3D Glycogen Phosphorylase B; 408 619 - -
Phac9g01387 643 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 131 635 - -
Phac9g01387 643 FunFam Starch synthase, chloroplastic/amyloplastic 135 420 - -
Phac9g01387 643 CDD GT5_Glycogen_synthase_DULL1-like 135 635 - -
Phac9g01387 643 Pfam Glycosyl transferases group 1 450 601 IPR001296 GO:0016757
Phac9g01387 643 Pfam Starch synthase catalytic domain 135 393 IPR013534 -
Phac9g01387 643 Hamap Glycogen synthase [glgA]. 134 636 IPR011835 GO:0004373
Phac9g01387 643 Gene3D Glycogen Phosphorylase B; 154 632 - -
Phac9g01387 643 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 106 642 - -
Phac9g01387 643 NCBIfam glycogen/starch synthase, ADP-glucose type 135 633 IPR011835 GO:0004373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g01387 Phac-Chr9 11131617 11140262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g01387 109 633 Glycosyltransferase AT3G01180 50.376 4.29e-171 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01387 K00703 - gmx:100807354 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01387 9 11131617 11140262 Phac9g01387 9 11131617 11140262 ECH