Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g01374 ATGAAAGGTTCATGTCTTCTTCCTTCGCACTCTTTCACCGGAATCAGGACAAGCAAAGAGCTTCCGCATATGCTATCATTGTGTGAGTTGAAAAGCATAGCATGCTTCTCGGTTTGTAATCAAAGGCAAAATTACAATCAAAAGCTTTACATTATTCCCATTAGGACTGCTTCTGTTCGGGTCCGCATCGCAAGATCTTCAGTAGGGTCATTGGAATGTGATGGGACAGGCCCACATAGTGATGCTTATTCAGGATTTTCAGCTCCAAATGACCATCAGAGAATTGGCAGTTTAGAAAGAGAATTGGAAGAGTTATTTGATGAAGTGAAGAGAATGATTAGGATGGGAAACAAAAATGATGCTATAGACCTGCTAACTGCTAATTACGAAGCCGTCAAAGAGAGCCTGAATGCAGGTACTAAAGGCATAGAAGAAGCTGCAATTTTGGATGTCATAGCACTAGGTTACATGGCAGTTGGAGACTTAAAATTTGTTGGATCTTTGTTGGATATGATGAAAGAAGTTGTTGACAATTTGAAGGATGATGCACCTCGTCTGGATTCAATACTTATGCATATGGGAAGTATGTACGCAACATTGAACATGTTTGAAAAATCATTGGACACATATCAGAGGGCTCTCTACATTATGGAGGGGACCTACGGTAAGGATAGTACTTTACTTGTCACGCCTTGTTTGGGTATGGCAAAAGTTCTTGGCTCTTTCGGAAAAGCAACAAAAGCCATAGAGATTTACCAGCGTGTGATCACTCTTTTGGGATCAAGTAGAGGTGCCCAAAGTAAGGATTTGGTTGTACCTTTACTTAGCCTTGGCAATCTTTTACTCAAAGAAAGGAGAGCCAATGACGCTGAAACTCATTTTACTAGAGTTCTCGACATATACACTAAATTATATGGACAAAATGATGGAAGAATTGGGATGGCTATGAGTTCCCTAGCCCGAGTTAAGAGTGCTCAAGGGAAATCAGATGAAGCAATACAATTGTTTAAACGTGCTATTCAGGTCATGAAGGATTCAAATTACTTGTCACCAGATGACAGTATAATGGAAAAGATGAGGGTGGATCTATCTGAATTACTTCATGCCGCTGGGAGAGGACAAGAAGGCAGAGAGCTATTAGAGGAGTGTTTGTGGATCACTGAGAGGCACAAAGGAAAGGAGCACCCCATCCTGGTGACGCACATGATAAATCTTGCAACTTCGTATTCACGGTCAAAGAATTATGCAGATGCCGAGCACCTGTTGAGAAGAAGTTTGCAAATCATGATAAAGCATAAGGGAACTGATGACCAGTCCATCAGCTTTCCTATGTTACATCTTGCAGTTACACTCTACCATTTGAAAAAGGATGAAGAAGCAGAGAAACTTGCACTGGAGGTTTTGCGGATCCGTGAGAAGGCCTTTGGAAAAAATTCCCTTCCTGTTGGGGAGGCTTTGGATTGTTTGGTGTCTATTCAAACCAGACTTGGTAAGGATGACAGTGAGTTGCTCGAGCTGCTTAGGAGGATCTTGAGTATCCAAGAAAGAGAATTTGGATATGAAAGTGAGGAGGTTTTGGTTAGCCTGAAAAAAATTGTATACTACTTGGATAAACTAGGGAAGAAAGATGAAAAGCTTACCCTTCATAGAAGATTGTCTGTGCTTAGGAAAAAGTATAACCAGATGGTTAACTACTAA 1698 0.4093 MKGSCLLPSHSFTGIRTSKELPHMLSLCELKSIACFSVCNQRQNYNQKLYIIPIRTASVRVRIARSSVGSLECDGTGPHSDAYSGFSAPNDHQRIGSLERELEELFDEVKRMIRMGNKNDAIDLLTANYEAVKESLNAGTKGIEEAAILDVIALGYMAVGDLKFVGSLLDMMKEVVDNLKDDAPRLDSILMHMGSMYATLNMFEKSLDTYQRALYIMEGTYGKDSTLLVTPCLGMAKVLGSFGKATKAIEIYQRVITLLGSSRGAQSKDLVVPLLSLGNLLLKERRANDAETHFTRVLDIYTKLYGQNDGRIGMAMSSLARVKSAQGKSDEAIQLFKRAIQVMKDSNYLSPDDSIMEKMRVDLSELLHAAGRGQEGRELLEECLWITERHKGKEHPILVTHMINLATSYSRSKNYADAEHLLRRSLQIMIKHKGTDDQSISFPMLHLAVTLYHLKKDEEAEKLALEVLRIREKAFGKNSLPVGEALDCLVSIQTRLGKDDSELLELLRRILSIQEREFGYESEEVLVSLKKIVYYLDKLGKKDEKLTLHRRLSVLRKKYNQMVNY* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g01374 565 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 105 548 - -
Phac9g01374 565 Coils Coil 95 115 - -
Phac9g01374 565 Gene3D Tetratricopeptide repeat domain 359 564 IPR011990 GO:0005515
Phac9g01374 565 Gene3D Tetratricopeptide repeat domain 161 358 IPR011990 GO:0005515
Phac9g01374 565 Pfam MalT-like TPR region 188 468 IPR041617 -
Phac9g01374 565 SUPERFAMILY TPR-like 188 428 IPR011990 GO:0005515
Phac9g01374 565 SUPERFAMILY TPR-like 362 497 IPR011990 GO:0005515
Phac9g01374 565 ProSiteProfiles TPR repeat profile. 313 346 IPR019734 GO:0005515
Phac9g01374 565 ProSiteProfiles TPR repeat profile. 187 220 IPR019734 GO:0005515
Phac9g01374 565 SMART tpr_5 187 220 IPR019734 GO:0005515
Phac9g01374 565 SMART tpr_5 229 262 IPR019734 GO:0005515
Phac9g01374 565 SMART tpr_5 313 346 IPR019734 GO:0005515
Phac9g01374 565 SMART tpr_5 399 432 IPR019734 GO:0005515
Phac9g01374 565 SMART tpr_5 271 304 IPR019734 GO:0005515
Phac9g01374 565 SMART tpr_5 441 474 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g01374 - - gmx:100805230 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g01374 9 11033853 11038456 Phac9g01374 9 11033853 11038456 ECH