Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00979 ATGGCTAACAACGCTGCTGCCTGTGCTGACAGAGCAACTAGTGACATGCTCATTGGCCCGGACTGGGCTATCAACATAGAGTTGTGTGATATCATTAATATGGACCCGGGGCAAGCAAAGGATGCATTGAAGATACTCAAAAAGCGTTTGGGCAGTAAAAATCCAAAAATACAGCTTCTGGCACTTTTTGTATTGGAGACCCTCAGTAAAAATTGTGGTGAAAGTGTATTTCAGCAGATAATCGAGCGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGCCAGATTTAAATGTGAGGGAAAAGATACTGATTTTAATTGATACATGGCAAGAAGCTTTTGGGGGGTCTACTGGGGTTTATCCTCAATATCATGCAGCGTATAATGAATTGAAGTCTGCTGGAGTTGAGTTTCCACCACGAGATGAGAATAGTGTACCATTCTTCACTCCTCCTCAAACCCAGCCAATTATTCATTCTGCTGAAGAATATGATGATGCTACTATTCAGGCTTCTCTCCAGTCAGATGCATCTGGCCTTAGTTTGATCGAGATTCAAAATGCTGAAGGCCTAGCTGATGTGTTGATGGAAATGCTTAGTGCCTTGAATCCTAAAGACCATGAGGGTGTGAAGGAGGAAGTGATTGTTGACCTTGTTGACCAGTGCCGTTCATACCAAAAGCGGGTCATGCTTCTTGTGAACACTACTACGGATGAGCAGCTTTTAGGTAAGGGATTGGCACTGAATGACAGCCTTCAGCGAGTGCTCTGTAGACATGATGATATTGTGAAAGGAACTTCTGATTCAGGTGCTAGAGAAGCAGAAACTACAGTTCTGCCACTTGTAAATGTAAACCATGAAGATGATGAATCAGAAGAGGATTTTGCTCAACTAGCCCATAGGTCATCACGTGATTCTCTTGCACAGAATAGGAAACCAGTCTATGACAAGGCAGAACCAGGGAGGATAAACCCAGTTATTCCCCCACCGCCATCATCAAAGAAGCCTGTCTACTCTGGCATTGGTGTGGTTGACTATCTCAGCGGTGATACATACAAGACAGAAGGATCTCCTCAAAACTCAGAACGCACTTCATTTGCAGCTCCTGTCCATTCTAGCCCTAATCCAACCTCATCAGTGTCTTCATCTCGTCCCCATGCCGTGAGTACCTCAGCACCTATTTTTAGCAGCCAGCCTGTCTATGATGAACAGCCATCTTCTGAGCGGCTGCCTCAAGCTCCCTTGGACACCCAATCTTCTGGCATCATTCCACCCCCACCTTCAAAGTATAATCAGAGACAACAGTTTTTTGAGCAACAAGGTGCATCCCATTCAAGTAGTGGATCCAATTCCTCTTATGACAGCTTGGTGGGACAAACTCAAAATCTCTCGCTGAATTCATCCACCCCAACCAAAGAACAGAAGCCAGAAGATGCCCTTTTCAAAGATCTTGTTGATTTTGCGAAATCCAAAACCTCATCATCTTCCAAACCCAATAATAGGTCATATTGA 1518 0.4401 MANNAAACADRATSDMLIGPDWAINIELCDIINMDPGQAKDALKILKKRLGSKNPKIQLLALFVLETLSKNCGESVFQQIIERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGSTGVYPQYHAAYNELKSAGVEFPPRDENSVPFFTPPQTQPIIHSAEEYDDATIQASLQSDASGLSLIEIQNAEGLADVLMEMLSALNPKDHEGVKEEVIVDLVDQCRSYQKRVMLLVNTTTDEQLLGKGLALNDSLQRVLCRHDDIVKGTSDSGAREAETTVLPLVNVNHEDDESEEDFAQLAHRSSRDSLAQNRKPVYDKAEPGRINPVIPPPPSSKKPVYSGIGVVDYLSGDTYKTEGSPQNSERTSFAAPVHSSPNPTSSVSSSRPHAVSTSAPIFSSQPVYDEQPSSERLPQAPLDTQSSGIIPPPPSKYNQRQQFFEQQGASHSSSGSNSSYDSLVGQTQNLSLNSSTPTKEQKPEDALFKDLVDFAKSKTSSSSKPNNRSY* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00979 505 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Phac9g00979 505 MobiDBLite consensus disorder prediction 302 340 - -
Phac9g00979 505 SUPERFAMILY ENTH/VHS domain 4 142 IPR008942 -
Phac9g00979 505 MobiDBLite consensus disorder prediction 302 320 - -
Phac9g00979 505 MobiDBLite consensus disorder prediction 352 482 - -
Phac9g00979 505 Gene3D - 2 158 IPR008942 -
Phac9g00979 505 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Phac9g00979 505 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Phac9g00979 505 Pfam GAT domain 194 267 IPR004152 GO:0035091|GO:0043130
Phac9g00979 505 CDD VHS 10 135 - -
Phac9g00979 505 PIRSF TOM1 1 505 IPR014645 -
Phac9g00979 505 PANTHER TOM1-LIKE PROTEIN 1 500 IPR044836 GO:0035091|GO:0043130|GO:0043328
Phac9g00979 505 FunFam TOM1-like protein 2 4 151 - -
Phac9g00979 505 Pfam VHS domain 9 136 IPR002014 GO:0035091|GO:0043130
Phac9g00979 505 CDD GAT_GGA-like_plant 186 264 - -
Phac9g00979 505 Gene3D - 176 274 IPR038425 -
Phac9g00979 505 MobiDBLite consensus disorder prediction 354 476 - -
Phac9g00979 505 SUPERFAMILY GAT-like domain 140 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00979 Phac-Chr9 7500703 7507766 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00979 - - gmx:100792343 820.076