Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00955 ATGTGTCTCCTAAGCCAATCTGAGTTGAAGCGTATTTTTGAGAAAGTGGACGTGAATGGCGATGGGTTCGTGAGCCTTGAGGAGCTGAATCGGATGCTTCAAATGACAGGTAATTCCCACTATACCATACAAGAGTTGGAATCGCTGGTGGAAAACCAGAGCCTTGATTTCAGCCAGTTCTTGTTCTTTTACAACGGAGAAAGTAGAGCAAGTGGTGGTGGTGGTGACACAGAGGAATTGGAGTTGGAGAGCGACCTGATCAAAACCTTCAGGGTCTTTGACTTGGATGGAGATGGCTTCATCACCAGCCATGAGCTTGAGTCTGTCTTGAAAAGGCTTGGCATGTGGGATGAAACCAATTGCAATGATTCTAGAACCATGATTCGATTCTATGACACCAACTTCGATGGTCGTCTTGATTTTCAGGAGTTCAAGAATATGATGTTGGTTTCCAAAGCCTGA 462 0.4502 MCLLSQSELKRIFEKVDVNGDGFVSLEELNRMLQMTGNSHYTIQELESLVENQSLDFSQFLFFYNGESRASGGGGDTEELELESDLIKTFRVFDLDGDGFITSHELESVLKRLGMWDETNCNDSRTMIRFYDTNFDGRLDFQEFKNMMLVSKA* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00955 153 FunFam Calmodulin 1 3 151 - -
Phac9g00955 153 Gene3D - 4 65 - -
Phac9g00955 153 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Phac9g00955 153 ProSitePatterns EF-hand calcium-binding domain. 17 29 IPR018247 -
Phac9g00955 153 CDD EFh 85 148 IPR002048 GO:0005509
Phac9g00955 153 ProSitePatterns EF-hand calcium-binding domain. 94 106 IPR018247 -
Phac9g00955 153 SMART efh_1 123 151 IPR002048 GO:0005509
Phac9g00955 153 SMART efh_1 8 36 IPR002048 GO:0005509
Phac9g00955 153 SMART efh_1 85 113 IPR002048 GO:0005509
Phac9g00955 153 Pfam EF hand 8 35 IPR002048 GO:0005509
Phac9g00955 153 ProSiteProfiles EF-hand calcium-binding domain profile. 81 116 IPR002048 GO:0005509
Phac9g00955 153 Gene3D - 75 153 - -
Phac9g00955 153 Pfam EF-hand domain pair 84 148 IPR002048 GO:0005509
Phac9g00955 153 SUPERFAMILY EF-hand 7 149 IPR011992 -
Phac9g00955 153 ProSiteProfiles EF-hand calcium-binding domain profile. 119 153 IPR002048 GO:0005509
Phac9g00955 153 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 54 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00955 Phac-Chr9 7303360 7304249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00955 4 149 EF-hand Containing Proteins AT1G21550 41.216 2.43e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00955 K13448 - gmx:100527117 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00955 9 7303360 7304249 Phac9g00955 9 7303360 7304249 ECH