Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00935 ATGGCAGCGCTCTCGTATCCACCATTCTTCGCACTTCAGAGAATCACTTCCACCGATACCAACGCCAACGCTTTCTTCGTTCGCTCGCGTCCTTCTGTCCCTCCATGGCCTTGCCTGCGACGACGTCGTTGTGCACCCGCTCTCGTCGCCGTCGCCTCCGTTAAGGAAAATATCGGCCGTGTTCAAAAGCGTTTCACTGACTTCACGAGCTTGAACTATTGGGTTGTTCGCGACTACTACCGTCTCGTGAACTCTGTCAACGCCTTCGAGCCTCAGATTGAGGCGCTCTCCGATGAACAGCTGGCCGCGAAAACCTCCGAGTTTCGCCGCCGGCTCGCGCGAGGGGCCACGCTTGCCGACATTCAAGCTGAGGCGTTCGCTGTTGTTCGTGAAGCTGCTTGGAGAAAACTTAAAATGCGCCATTTCGATGTTCAGATTATTGGTGGGGCAGTGCTGCATGATGGTTCCATTGCTGAGATGAAAACTGGGGAGGGTAAAACCTTGGTTTCCACACTAGCTGCTTATCTAAATGCCCTAACCTCTGAGGGTGTTCATGTGGTAACTGTTAACGATTATTTAGCTCAGCGTGACGCTGAATGGATGGGACGTGTTCATCGTTTCTTAGGTCTCTCTGTCGGTCTTGTTCAGAGAGGAATGAATGCTGAAGAACGAAGAATCAACTACAGATGTGATATAACATATACCAATAATTCGGAGCTTGGCTTTGATTATCTGCGTGATAATCTGGCTGGAAATCGTGAACAACTTGTGATGAGATGGCCAAAGCCCTTTCATTTTGGAATCGTTGATGAAGTGGATTCTGTCTTGATAGACGAGGGAAGAAATCCTTTGCTAATCAGTGGTGAGGCTAGTAAAGATGCTGCACGATTCCCTGTAGCTGCAAAAGTAGCTGAACTGCTTATACAGGGCGTTCATTACAAAATGGAGCTTAAAGATAATTCTGTGGAGTTGACTGAGGAAGGAATTGCTCTTGCCGAAATGGCTTTAGAAACTAATGACCTTTGGGATGAAAATGATCCCTGGGCAAGCTTTGTGATGAATGCTATAAAAGCTAAAGAATTCTATCGTCGAGATGTGCAATACATTGTCAGAGATGGAAAGGCTTTGATTATCAATGAGCTGACTGGGAGAGTTGAAGAAAAAAGGAGATGGTCTGAGGGGATTCACCAGGCTGTGGAGGCAAAGGAAGGTTTGAAGATTCAGGCAGATTCTCTTGTTGTGGCACAGATCACATACCAGTCATTATTCAAGCTCTATCCAAAGTTGTCAGGAATGACTGGAACTGCCAAAACAGAAGAGAAGGAGTTCTTAAAAATGTTTCAGATGCCAGTCATTGAAGTGCCCACAAATCTTCCTAATATTCGAAATGATTTACCAATTCAAGCTTTTGCTACTGCTCGTGGGAAATGGGAGCAAGTTCGCCGAGAAGTTGAATATATGTTTAGACAAGGTCGGCCTGTCTTAGTTGGGACTACTAGTGTAGAAAATTCAGAGCTTTTGTCTGGTCTGCTTAGGGAATGGAATATTCCTCATAATGTTCTGAATGCTAGACCCAAGTATGCTGCAAAAGAAGCTGAAGTTGTTGCACAAGCAGGACGGAAACATGCCATTACCCTCTCTACAAATATGGCTGGCAGGGGCACAGATATAATCCTCGGAGGAAATCCAAAAATGCTTGCCAGAGAAATTATAGAGGATAGCTTAATTTCATTTTTGACACGGGAGGATCCAAAAAACATTGAACTTGCAGAGGAAGCTATTTCACAAATGGTGCTTCCAAAGATAAAGGTTGGTTCATCATCAATGGCCTTACTGGCTAAGACAACCCTAATGGCCAAATATGTATCCAAAAGTGAGGGTAAAAGTTGGACATATGAGAAGGCTAAATCTTTTATCTTGGAGGCTATTGAAATGAATCTTTCATATAGTTTGGAAGAGCTGGAGAAGCTTGCTAATGAAGAATCTGAGGTCTACCCTCTTGGTCCAACTGTAGCACTAGCCTATCTGTCAGTTTTGAAGGATTGTGAAGAACACTGTTTGAATGAAGGTTCCGAGGTAAAAAGGCTTGGGGGACTTCATGTGATTGGTACATCTTTACATGAGTCCCGGAGAATAGATAACCAGCTGCGTGGCAGAGCAGGAAGACAAGGGGATCCAGGATCAACACGATTTATGGTCAGCCAGTCTCACTGTTCCTCGCCGACAACTTTTTGGCGAGCTTTTTCTGGCTGA 2253 0.451 MAALSYPPFFALQRITSTDTNANAFFVRSRPSVPPWPCLRRRRCAPALVAVASVKENIGRVQKRFTDFTSLNYWVVRDYYRLVNSVNAFEPQIEALSDEQLAAKTSEFRRRLARGATLADIQAEAFAVVREAAWRKLKMRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTSEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLVQRGMNAEERRINYRCDITYTNNSELGFDYLRDNLAGNREQLVMRWPKPFHFGIVDEVDSVLIDEGRNPLLISGEASKDAARFPVAAKVAELLIQGVHYKMELKDNSVELTEEGIALAEMALETNDLWDENDPWASFVMNAIKAKEFYRRDVQYIVRDGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSLVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRNDLPIQAFATARGKWEQVRREVEYMFRQGRPVLVGTTSVENSELLSGLLREWNIPHNVLNARPKYAAKEAEVVAQAGRKHAITLSTNMAGRGTDIILGGNPKMLAREIIEDSLISFLTREDPKNIELAEEAISQMVLPKIKVGSSSMALLAKTTLMAKYVSKSEGKSWTYEKAKSFILEAIEMNLSYSLEELEKLANEESEVYPLGPTVALAYLSVLKDCEEHCLNEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSQSHCSSPTTFWRAFSG* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00935 750 Coils Coil 640 660 - -
Phac9g00935 750 Hamap Protein translocase subunit SecA [secA]. 60 750 IPR000185 GO:0005524|GO:0006605|GO:0006886
Phac9g00935 750 SMART SecA_DEAD_2 65 444 IPR011115 GO:0005524|GO:0016020|GO:0017038
Phac9g00935 750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 459 736 IPR027417 -
Phac9g00935 750 Pfam SecA DEAD-like domain 75 443 IPR011115 GO:0005524|GO:0016020|GO:0017038
Phac9g00935 750 SMART SecA_PP_bind_2 289 400 IPR011130 GO:0016020|GO:0017038
Phac9g00935 750 Pfam SecA preprotein cross-linking domain 300 400 IPR011130 GO:0016020|GO:0017038
Phac9g00935 750 CDD DEXDc_SecA 100 456 - -
Phac9g00935 750 FunFam Preprotein translocase SecA subunit 290 410 - -
Phac9g00935 750 Gene3D - 80 457 IPR027417 -
Phac9g00935 750 PRINTS SecA protein signature 228 248 IPR000185 GO:0005524|GO:0006605|GO:0006886
Phac9g00935 750 PRINTS SecA protein signature 418 435 IPR000185 GO:0005524|GO:0006605|GO:0006886
Phac9g00935 750 PRINTS SecA protein signature 159 173 IPR000185 GO:0005524|GO:0006605|GO:0006886
Phac9g00935 750 PRINTS SecA protein signature 175 185 IPR000185 GO:0005524|GO:0006605|GO:0006886
Phac9g00935 750 PRINTS SecA protein signature 381 403 IPR000185 GO:0005524|GO:0006605|GO:0006886
Phac9g00935 750 PRINTS SecA protein signature 455 468 IPR000185 GO:0005524|GO:0006605|GO:0006886
Phac9g00935 750 PRINTS SecA protein signature 121 145 IPR000185 GO:0005524|GO:0006605|GO:0006886
Phac9g00935 750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 457 IPR027417 -
Phac9g00935 750 FunFam Protein translocase subunit SecA 79 299 - -
Phac9g00935 750 CDD SF2_C_secA 462 734 IPR044722 -
Phac9g00935 750 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 147 310 IPR014001 -
Phac9g00935 750 SUPERFAMILY Pre-protein crosslinking domain of SecA 288 409 IPR036670 GO:0016020|GO:0017038
Phac9g00935 750 Gene3D - 290 410 - -
Phac9g00935 750 Gene3D - 459 738 IPR027417 -
Phac9g00935 750 ProSiteProfiles SecA family profile. 61 750 IPR014018 -
Phac9g00935 750 PANTHER SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 47 734 IPR000185 GO:0005524|GO:0006605|GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00935 Phac-Chr9 7104210 7116113 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00935 K03070 - gmx:100793437 1275.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00935 9 7104210 7116113 Phac9g00935 9 7104210 7116113 ECH