Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00901 ATGAAGCCGTTGCATTTGCGACCCATCAAGGTCTCTCTCCCGGCCATGACCACGAAGAAGAGAAAAAGATCCCCAAAACAGGTCCCAGTCCCTCCCTCAACGCCCCCAACTCCCCAAACCCAGGCCCGCCACTCCCTCAACACCGCAAAAGCCCGGGTCTGGGCCCCTCTCAACTTGACCCAGGCCGAACTCTCTCTGCCACTCACCTTCCCCACGGGCCAAACCTTCCGCTGGAAAAACACCGCCCCTCTACAATACACCGGCGTCGTTGGGCCCCACCTCATAACCCTCAAACACCTCCAAAATGGCCACGTTTCCTACTGCCTCCACTCCCACTCTAACCCCGAAAAAGCCAAAACCGCCTTGCTAGATTTCCTTAACGCCGCCGTTTCTCTCGCCGACTTGTGGAAGGCGTTTTCCGCTTCCGATGCGAGGTTCGCGGCGCTAGCGCTCCATTTGAGCGGTGCGAGGGTGCTCCGGCAAGACCCTTTCGAGTGTTTGATTCAGTTTCTATGCTCTTCCAATAACAACATTGCACGAATCACGAAGATGGTTGACCACGTTTCATCTCTGGGAATGCACGTGGGAGACGTTGGAGGATTTCAGTTCCACGTTTTCCCTTCCCTGGAACAACTTTCCTCCGTCTCAGAGCAACAACTCAGAGACGCGGGTTTCGGTTACAGGGCTAAATATATAATTGGTACGGTTAATGCTTTGCGATCAAAACCTGGTGGAGGGGAAGAGTGGCTTCGTTCTCTTCGTAAGTTGGATCTTCCAGATGTTATATCTGCACTTTCTACGTTACCTGGTGTGGGACCTAAAGTGGCTGCTTGCATTGCTCTCTTCTCGCTTGATCAACACCATGCCGTTCCTGTTGACACTCACGTCTGGCGGGTTCCCAGTTGA 906 0.5375 MKPLHLRPIKVSLPAMTTKKRKRSPKQVPVPPSTPPTPQTQARHSLNTAKARVWAPLNLTQAELSLPLTFPTGQTFRWKNTAPLQYTGVVGPHLITLKHLQNGHVSYCLHSHSNPEKAKTALLDFLNAAVSLADLWKAFSASDARFAALALHLSGARVLRQDPFECLIQFLCSSNNNIARITKMVDHVSSLGMHVGDVGGFQFHVFPSLEQLSSVSEQQLRDAGFGYRAKYIIGTVNALRSKPGGGEEWLRSLRKLDLPDVISALSTLPGVGPKVAACIALFSLDQHHAVPVDTHVWRVPS* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00901 301 SUPERFAMILY TATA-box binding protein-like 50 161 - -
Phac9g00901 301 FunFam N-glycosylase/DNA lyase 162 286 - -
Phac9g00901 301 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 57 167 IPR012904 GO:0003684|GO:0006289|GO:0008534
Phac9g00901 301 SUPERFAMILY DNA-glycosylase 162 299 IPR011257 GO:0003824|GO:0006281
Phac9g00901 301 CDD ENDO3c 164 299 IPR003265 GO:0006284
Phac9g00901 301 Pfam HhH-GPD superfamily base excision DNA repair protein 168 299 IPR003265 GO:0006284
Phac9g00901 301 Gene3D Hypothetical protein; domain 2 162 286 - -
Phac9g00901 301 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 38 299 - -
Phac9g00901 301 Gene3D - 40 126 - -
Phac9g00901 301 SMART endo3end 172 301 IPR003265 GO:0006284
Phac9g00901 301 MobiDBLite consensus disorder prediction 14 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00901 Phac-Chr9 6928774 6935656 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00901 K03660 - gmx:100789749 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00901 9 6928774 6935656 Phac9g00901 9 6928774 6935656 ECH