Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00499 ATGGGTTTCGGAAGCTCTTCTCTTCTCTCCATGGCTCTTCTTCTCCTCCTCTGCTCAACCATCCAAGCCATGGACGTGCTGAAGGTGCTCAGCGGACCCGAGTACGCGCTCTTCAGCAAAGCCCTAACAGAAGCCAATCTGGTTGACAAAATTAACTCCCTTAACGCCGTCACCGTCTTCCCCCTCTCCAACCCCGCCATGGGTAGCCTCGCCGGCAAGTCCCCCGAAGCACTCAAGGCCACCCTCATGACGCACGTTCTTCCCGGCTACTACGACGACAAGAAGCTCGTGGAATGCATAGGAAGCCAAACTCCAATCGAGACTCTCTACCAATCCTCCGGCCTTGCCCAGGGCAACCAGGGATTCATCAAAGTCCAGCTCATCAACGAAGGCGAGGTCGTCATAGGATCCGCCGCCCAAGCTCCCGGCACAGTCTACGACGCCGGCATGGTGCAGTTCGTCGCCAGAGAACCCGATGTTATTTCGGCTATTGAGCTCACCAAGCCCATTGTCGTACCTGGAATTGATAATTTCAGCGACGCTTCACGCCTCTGCATGGGGCTTCTCGCTGCAGCTTCCGCTTCTGCCGCTTTCATCCTTGCCCTCTAA 609 0.5632 MGFGSSSLLSMALLLLLCSTIQAMDVLKVLSGPEYALFSKALTEANLVDKINSLNAVTVFPLSNPAMGSLAGKSPEALKATLMTHVLPGYYDDKKLVECIGSQTPIETLYQSSGLAQGNQGFIKVQLINEGEVVIGSAAQAPGTVYDAGMVQFVAREPDVISAIELTKPIVVPGIDNFSDASRLCMGLLAAASASAAFILAL* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00499 202 ProSiteProfiles FAS1/BIgH3 domain profile. 22 152 IPR000782 -
Phac9g00499 202 Pfam Fasciclin domain 34 113 IPR000782 -
Phac9g00499 202 SUPERFAMILY FAS1 domain 31 133 IPR036378 -
Phac9g00499 202 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 180 IPR033254 -
Phac9g00499 202 Gene3D FAS1 domain 24 156 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00499 Phac-Chr9 3284673 3285362 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00499 - - pvu:PHAVU_009G1004000 320.472