Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00489 ATGTTAGAGGTGCAAAGTAGGTATGTTGCAGTGGGGAATGAACCATTCTTGTCAACATACAATGGCACCTACGAAACCACAACTCTTCCAGCACTTCAAAACATTCAGGCGGCTCTCACAAAGTCTGGTTTGAGCAACCGTGTGAAGGTCACAGTCCCCTTAAATGCTGATGTATACCAAAGCTCCTCAGAAAAGCCATCAGACGGCATTTTCAGACCAGACATCAACAGTGTGATGCTACAGATTGTGAAGTTCTTGAATGACAATGGCGCACCCTTCACAGTGAACATCTACCCTTTCATCAGCCTCTACGCTGACCCCAATTTCCCTGTTGACTATGCCTTCTTTAACGGCTACCAGCCTGCTATAAATGACAATGGAAGAACCTATGACAATGTGTTTGATGCTAACCATGATACCTTAGTGTGGGCACTGCAAAAGAATGGCTTTGGAAACTTGCCTATAATTGTGGGGGAAATTGGATGGCCTACAGATGGAGACAGAAATGCAAACCTTCAATATGCACAACATTTCAACCAAGGTTTCATGTCACGTTACATGTCTGGAAAAGGGACCCCAATGAGGCCTAGTCCTATAGATGCTTATTTGTTTAGTCTCATAGATGAAGATGCCAAAAGCATTCAGCCAGGGAACTTTGAGCGTCATTGGGGGATGTTTTACTTTGATGGAAAACCAAAATACCAACTTAATCTTGGGTCAGCACGAGGTAATGGGTTAGTAGGTGCTGATGGGGTTGATCATTTGGCTAAAAAATGGTGTGTTTTGAAACCCTCAGCAAATCTTAATGATGACCAAGTGGCACCTAGTGTGGCCTATGCTTGTCAAAATGCTGATTGCACTAGTCTTGGGTTTGGAACTTCATGTGGGAATTTAGATGTGCATGGTAACATCTCTTATGCTTTTAATAGTTACTATCAGGTAAATGACCAGATGGACAGTGCCTGCAAATTCCCTGGCCTTTCTATGATCACTGACAAGGATCCTTCTGTGGGAGATTGCAAGTTCAGAATCATGATTCAGACAGATTCTGCAGGGCTACATGGAAAAGTTGGATCTCTAACAACAATGTTGTGTTCTTTTCTTCTTTTGCTGTGCTGTAATCTTTTGTTTTGA 1134 0.4268 MLEVQSRYVAVGNEPFLSTYNGTYETTTLPALQNIQAALTKSGLSNRVKVTVPLNADVYQSSSEKPSDGIFRPDINSVMLQIVKFLNDNGAPFTVNIYPFISLYADPNFPVDYAFFNGYQPAINDNGRTYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQHFNQGFMSRYMSGKGTPMRPSPIDAYLFSLIDEDAKSIQPGNFERHWGMFYFDGKPKYQLNLGSARGNGLVGADGVDHLAKKWCVLKPSANLNDDQVAPSVAYACQNADCTSLGFGTSCGNLDVHGNISYAFNSYYQVNDQMDSACKFPGLSMITDKDPSVGDCKFRIMIQTDSAGLHGKVGSLTTMLCSFLLLLCCNLLF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00489 377 ProSitePatterns Glycosyl hydrolases family 17 signature. 153 166 IPR000490 GO:0004553|GO:0005975
Phac9g00489 377 SMART X8_cls 258 342 IPR012946 -
Phac9g00489 377 SUPERFAMILY (Trans)glycosidases 7 237 IPR017853 -
Phac9g00489 377 Gene3D - 254 352 - -
Phac9g00489 377 Pfam Glycosyl hydrolases family 17 3 237 IPR000490 GO:0004553|GO:0005975
Phac9g00489 377 Gene3D Glycosidases 2 244 - -
Phac9g00489 377 Pfam X8 domain 258 328 IPR012946 -
Phac9g00489 377 FunFam Glucan endo-1,3-beta-glucosidase 8 254 351 - -
Phac9g00489 377 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 4 331 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00489 Phac-Chr9 3170549 3174091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00489 4 373 Glycoside Hydrolase AT4G31140 69.189 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00489 K19893 - gmx:100796552 706.057