Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00428 ATGGCTGCTACTCCTTCTTCTACATACCCTTTCGGAGTTCCTTTACACTCTCTTGGCCGCAGAGTGGATTGCTCAACCTCCCTATTCCCCCTCCACGTGGAACTCTCCACAATTTCTTTGTCACCTCGTTCTACTTCGAAGGGATTAGTTGATCGAGTGTGTGCCCAGCTTGATAGTGATGACTACTGCTGGGAGAAAGTTCCAACACCCATTCTTGATATGGTTGAAAACCCTCTTTACTTGAAGAACTTATCTCTTAAGGAACTGAATCAACTAGCAGTTGAAATTCGTTCAGATTTGTCTTCTATTATGTCAGGTACACAAATATCACCAAAAGCAAGTATGGCAGTGGTGGAGCTGACAGTTGCAATACATCATGTTTTCAATGCTCCAGTGGACAGAATATTGTGGGATGTTGGGGATCAAACATATGCACATAAGATTCTTACAGGAAGGCGATCTCTCATGACAACAATGAAAAGAAAGAACGGTCTCTCTGGTTTTACTTCCCAATTTGAGAGTGAATATGATGCATTTGGTGCAGGTCATGGATGCAACAGTATTTCCGCTGGACTTGGCATGGCAGTTGCCCGGGATATTAAGGGCAGGCAGGAACGTGTAGTTGCAGTTATCAGCAATTGGACAACTATGGCTGGTCAGGCATATGAGGCAATGAGCAATGCAGGATACTTGGACTCAAATATGGTTGTGATTTTGAATGATAGTCGTCACTCTTTACTTCCAAAAATCGAGGAGGGCCCAAAGACATCTGTCAATGCCCTATCTAGTACCCTGAGCAAGCTCCAGTCCAGTAAATCTTTCCGAAGGTTTAGAGAAGCTGCCAAGGGTGTTACAAAACGAATTGGTAGAGGTATGCATGAGTTGGCGGCTAAAGTCGATGAATATGCTCGTGGTATGGTAGGCCCCCTAGGTTCTACTCTTTTTGAGGAGCTTGGGTTGTACTACATAGGCCCAGTGGATGGACACAATATTGAGGATCTAATATGTGTTCTGCAAGAAGTTGCTTCCCTGGATTCAATGGGACCAGTCTTGGTACATGTGATAACTGATGAAAATCAGGGAGATGAAAACAATCAGAAAAGTGATATAACAAATAGGCAACAAGATGGTGGCATATCTTGTGATCCTTTTAAATATGATTCGTTAGATAATGTTGTTCGGCCTCAAACATATGGCGATTGCTTTGTGGAGACTTTGGTTGCAGAAGCAGAGAAAGACAAAGATATTGTGGTTGTTCATGCTGGAATAGCGATGGAGTCATCCCTTGAATTGTTTCAGGGGAAATTTCCAGATAGGTTTTTTGACGTGGGAATGGCTGAGCAACATGCAGTCACCTTTGCTTCTGGTTTGGCATGTGGTGGATTGAAGCCATTTTGCATTATACCTTCTTCCTTTCTGCAAAGAGCCTATGATCAGGTGGTACACGATGTTGATCAACAGAGAATTCCAGTGCGCTTTGTCATCACAAGTGCAGGATTGGTAGGTTCTGATGGTCCCCTCCAATGTGGAGCATTTGATATAACCTTTATGTCGTGCTTACCAAACATGATTGTCATGGCACCATCTGATGAGGTTGAACTCATGCACATGGTAGCTACTGCTACTCATATCAATAATCAACCAGTCTGCTTTCGGTATCCAAGGGGTGCCCTGGTTGGGAAAAGCTACACTGTAGGCGATGGAATCCCCATCAAGGTAATTAGGCGGCACTCTATTTTCTCGATACATTGTGAGTTATACTGA 1764 0.4359 MAATPSSTYPFGVPLHSLGRRVDCSTSLFPLHVELSTISLSPRSTSKGLVDRVCAQLDSDDYCWEKVPTPILDMVENPLYLKNLSLKELNQLAVEIRSDLSSIMSGTQISPKASMAVVELTVAIHHVFNAPVDRILWDVGDQTYAHKILTGRRSLMTTMKRKNGLSGFTSQFESEYDAFGAGHGCNSISAGLGMAVARDIKGRQERVVAVISNWTTMAGQAYEAMSNAGYLDSNMVVILNDSRHSLLPKIEEGPKTSVNALSSTLSKLQSSKSFRRFREAAKGVTKRIGRGMHELAAKVDEYARGMVGPLGSTLFEELGLYYIGPVDGHNIEDLICVLQEVASLDSMGPVLVHVITDENQGDENNQKSDITNRQQDGGISCDPFKYDSLDNVVRPQTYGDCFVETLVAEAEKDKDIVVVHAGIAMESSLELFQGKFPDRFFDVGMAEQHAVTFASGLACGGLKPFCIIPSSFLQRAYDQVVHDVDQQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEVELMHMVATATHINNQPVCFRYPRGALVGKSYTVGDGIPIKVIRRHSIFSIHCELY* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00428 587 Gene3D - 396 565 - -
Phac9g00428 587 Pfam Transketolase, pyrimidine binding domain 397 558 IPR005475 -
Phac9g00428 587 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 69 458 IPR029061 -
Phac9g00428 587 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED 47 573 IPR005477 GO:0008661|GO:0016114
Phac9g00428 587 Gene3D - 64 363 - -
Phac9g00428 587 SMART Transket_pyr_3 396 561 IPR005475 -
Phac9g00428 587 FunFam 1-deoxy-D-xylulose-5-phosphate synthase 395 563 - -
Phac9g00428 587 Pfam 1-deoxy-D-xylulose-5-phosphate synthase 72 356 IPR005477 GO:0008661|GO:0016114
Phac9g00428 587 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 395 561 IPR029061 -
Phac9g00428 587 CDD TPP_PYR_DXS_TK_like 402 555 - -
Phac9g00428 587 NCBIfam 1-deoxy-D-xylulose-5-phosphate synthase 74 571 IPR005477 GO:0008661|GO:0016114
Phac9g00428 587 CDD TPP_DXS 113 361 IPR005477 GO:0008661|GO:0016114
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00428 Phac-Chr9 2699790 2707044 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00428 K01662 - gmx:100793268 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00428 9 2699790 2707044 Phac9g00428 9 2699790 2707044 ECH