Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00351 ATGGATATTGAGATGCAATGGGATGGTAACCCGAATATCGTTCTTGACATTAAAACCCGAGTTGGTGTAGTACTTCCTGTACAGGTAAAAAATATTGGATTCACTGGGGTTTTCAGGTTGATCTTCAAACCACTAGTGAATGAGTTCCCCGGTTTCGGAGCTGTTTGTTTTTCCTTGAAAGAAAAGAAAGATCTGGATTTCACTCTGAAAGTTATTGGTGGTGATTTATCAGCTTTACCAGGGATATCTGACGCTATAGAGGAAACAATTAAAGATGCGATTGAAGACTCTGTAAGTTGGCCTGTACGCCAAGTTATACCCATTTTACCGGGGGATTACAGTAATCTAGAGTTGAAACCGGTTGGAATACTAGAAGTAAAACTAGTGCAAGCAAAGAGCTTAACAAATAAAGATTTGATTGGGAAATCCGATCCTTATGCTGTCCTTTTTGTACGCCCGCTTCGTGACAGAACCAAAACCAGTAAAGTAATGAACAACCAGTTGAATCCAGTATGGAATGAACACTTTGAATTCACTATTGAAGATGCGGCAACGCAGCACTTGACCATAAGAGTTTTCGATGATGAAGGCATTCAAGCTTCTGAACTTATTGGCTGTGCCCAAACTTCACTGAAGGACCTCGAACCTGGTAAAGTCAAGGATGTGTGGCTTAAGCTGGTTAAGGATTTGGAGGTCCATAGAGATAACAAATATAGGGGTGAGGTGCACTTGGAGCTCTTGTACTGCCCATTTGGAGTCGAAAGCGCCATTAAGAACCCTTTTGACCCTGATTTCTCATTAACCTCGTTCGAGAAGACCCTCAAGAGTGGTGAAGCAGAGGGTGAGGATCATACTGTGTCACGTAGGAAAAGCAACGTGATTGTAAGAGGGGTTCTATCCGTGACGGTGATTTCAGCTGAAGACTTACCAGTGGTGGACTTAATGGGCAAGGCTGATCCATTTGTTGTCCTTAGTTTGAAAAAAACAGAAAAAAAACTCAAGACCAGAGTTGTAAATGAATCCCTAAACCCAGTTTGGAATCAAACATTTGATTTTGTTGTGGAGGATGGCTTACACGAAATGTTAATTCTGGAAGTCTACGATCATGATACGTTTGGCAAGGAAAAAATTGGAAGAGTGATCTTAACACTGACTAAGGTCATCTTAGAAGGAGAATACAATGAAACTTATCCTCTTGATGGAGCTAAATCCGGAAACATTTCTTTATATTTGAAGTGGACTCCGCAGCACAAATTCCGGGATACTTAG 1269 0.4113 MDIEMQWDGNPNIVLDIKTRVGVVLPVQVKNIGFTGVFRLIFKPLVNEFPGFGAVCFSLKEKKDLDFTLKVIGGDLSALPGISDAIEETIKDAIEDSVSWPVRQVIPILPGDYSNLELKPVGILEVKLVQAKSLTNKDLIGKSDPYAVLFVRPLRDRTKTSKVMNNQLNPVWNEHFEFTIEDAATQHLTIRVFDDEGIQASELIGCAQTSLKDLEPGKVKDVWLKLVKDLEVHRDNKYRGEVHLELLYCPFGVESAIKNPFDPDFSLTSFEKTLKSGEAEGEDHTVSRRKSNVIVRGVLSVTVISAEDLPVVDLMGKADPFVVLSLKKTEKKLKTRVVNESLNPVWNQTFDFVVEDGLHEMLILEVYDHDTFGKEKIGRVILTLTKVILEGEYNETYPLDGAKSGNISLYLKWTPQHKFRDT* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00351 422 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 1 109 IPR031468 GO:0008289
Phac9g00351 422 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 413 IPR045050 GO:0008289
Phac9g00351 422 ProSiteProfiles C2 domain profile. 103 224 IPR000008 -
Phac9g00351 422 FunFam Extended synaptotagmin-2 278 417 - -
Phac9g00351 422 Pfam C2 domain 122 226 IPR000008 -
Phac9g00351 422 Pfam C2 domain 297 399 IPR000008 -
Phac9g00351 422 FunFam Plant synaptotagmin 117 259 - -
Phac9g00351 422 CDD C2 124 226 - -
Phac9g00351 422 PRINTS C2 domain signature 362 370 IPR000008 -
Phac9g00351 422 PRINTS C2 domain signature 340 353 IPR000008 -
Phac9g00351 422 PRINTS C2 domain signature 314 326 IPR000008 -
Phac9g00351 422 SMART C2_3c 298 396 IPR000008 -
Phac9g00351 422 SMART C2_3c 123 223 IPR000008 -
Phac9g00351 422 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 120 251 IPR035892 -
Phac9g00351 422 CDD C2 299 399 - -
Phac9g00351 422 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 293 416 IPR035892 -
Phac9g00351 422 Gene3D C2 domain 294 421 IPR035892 -
Phac9g00351 422 Gene3D C2 domain 118 257 IPR035892 -
Phac9g00351 422 ProSiteProfiles C2 domain profile. 280 397 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00351 Phac-Chr9 2280723 2292037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00351 114 414 Lipid Metabolism Gene Families AT1G51570 23.054 7.79e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00351 - - gmx:100787972 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00351 9 2280723 2292037 Phac9g00351 9 2280723 2292037 ECH