Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00288 ATGGCTCTCGGATTCTTCGCCCTCGCTCTCTTCCTCTTCCTCACTCTCGACTCTGACGTTGCTTCTTCTTCCACTGCTTCTGCCTCTGTCTCCGCGGCTTCCTCCGAAGGCGTCGAGGTTCAGGTTACCTATGGCACGGTGCTGAAGCTTATGCACGAGAAAACCAAATTTCGGTTGCATTCTCATGACGTGCCCTACGGTTCTGGGAGTGGACAACAATCGGTTACTGGTTTCCCCAGTGTTGACGATTCCAATAGCTATTGGATTGTTAGACCTCAGCCAGGAACTAATGCCAAACAAGGTGATGCCATTAAAAGTGGTACCATCATTAGATTGCAGCACATGAGGACAAGGAAGTGGCTGCACAGCCATTTGCATGCATCCCCTATATCCGGCAATCTCGAGGTGAGTTGTTTTGGAGGAGAAACTGACTCTGACACTGGGGACTATTGGAGGCTTTCAATAGAGGGAAATGGGAAGACTTGGAAGCAGGATCAGAAGATTCGCCTTCAGCATATTGACACTGGAGGCTATCTACATAGTCACGATAAGAAATACAGCCGAATTGCTGGGGGACAGCAGGAGGTTTGTGGCGTTCGCGAAAAGCGTGCTGACAATATCTGGTTGGCAGCCGAAGGTGTCTACCTTCCTGTGACTGAAAGCAAATGA 669 0.4963 MALGFFALALFLFLTLDSDVASSSTASASVSAASSEGVEVQVTYGTVLKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPSVDDSNSYWIVRPQPGTNAKQGDAIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGETDSDTGDYWRLSIEGNGKTWKQDQKIRLQHIDTGGYLHSHDKKYSRIAGGQQEVCGVREKRADNIWLAAEGVYLPVTESK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00288 222 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 217 - -
Phac9g00288 222 ProSiteProfiles MIR domain profile. 159 213 IPR016093 -
Phac9g00288 222 Pfam MIR domain 73 206 IPR016093 -
Phac9g00288 222 ProSiteProfiles MIR domain profile. 39 93 IPR016093 -
Phac9g00288 222 SUPERFAMILY MIR domain 40 213 IPR036300 -
Phac9g00288 222 FunFam Stromal cell-derived factor 2-like protein 23 222 - -
Phac9g00288 222 ProSiteProfiles MIR domain profile. 101 156 IPR016093 -
Phac9g00288 222 SMART mir_2 39 93 IPR016093 -
Phac9g00288 222 SMART mir_2 101 156 IPR016093 -
Phac9g00288 222 SMART mir_2 159 213 IPR016093 -
Phac9g00288 222 Gene3D - 25 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00288 Phac-Chr9 1872598 1876984 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00288 - - lja:Lj1g3v1819850.2 381.333