Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03788 ATGACTGTGGGGGCAGGAATATCTGTTGCAGATGGAAACTTGATGGTGTTGGGGAAGAGAGTGCTGAGCCATGTCCATGACAAGGTTGTTGTTACCCCTGCATGTGGGGGTGCGTTGCTCAATGGGGCATTCATTGGGGTTGAATCCCATCAAAAGGGTAGTCGCACAGTCTTTCCAATCGGCAAGCTTGAGGGGTTGCGGTTTATGTGTGTTTTCCGGTTCAAGATGTGGTGGATGACGCAGAGAATGGGCACTTGCGGACAAGAAGTTCCCATTGAGACGCAGTTCTTGCTGGTTGAAGCACAAAGTGGCTCTGATATTGATACAGGAGAAGAAGACCAAGCTGCTGCTACCTATGCAGTTTTCTTACCCCTTCTGGAAGGAGATTTCAGAGCAGTTCTTCAGGGGAATGACCGAAACGAGATTGAAATCTGTGTTGAAAGTGGTTGTCCTGCTGTGGAGGACTTCGATGGGACTCATTTAGTTTATATCGGGGCTGGATCCGACCCTTTTGAAGTCATAACAACTGCTGTCAAAACTGTTGAGAAACACTTAGGGACCTTTGTTCATCGCGAGCGAAAGAAGATGCCAGATATGTTGAACTGGTTTGGATGGTGTACATGGGATGCTTTCTACACCAATGTCACTTCAGAGAATGTGAAGCAAGGATTACAGAGGTGCTTCGAGAAAGGTGGAATTCCTGCTAAGTTTGTTATAATTGATGATGGCTGGCAATCTGTTGACATGGATCCCAATGGTACTGAATGGAAATCAGATAATGCAGCCAACTTTGCAAATCGCTTAACCAACATCAAAGAGAATCACAAATTCCAGAAGGATGGCAAAGAAGGTCAGAGAGTAGAGGACCCAGCTTTAGGACTTCGTCATATGACCAATGAAATCAAACAAGAGCATGATATAAAGTATGTATATGTGTGGCATGCAATAACAGGATACTGGGGTGGTGTTAAACCTGGGGTTACTGGCATGGAGCACTACGAGTCAAAGATGGCATTCCCTGTCTCATCTCCTGGAGTTGAGTCAAATCAACCAGATGAAGCTTTGGCAACCATTGCCATCAATGGACTTGGCCTTGTGAATCCGGAGAAAGTTTTTCACTTTTATGATGAACTTCACTCATATTTGGCATCTGCTGGTATTGATGGTGTGAAGGTTGATGTTCAGAATATCCTAGAAACTCTTGGAGCAGGACATGGTGGGAGGGTGAAACTTGCAAGGAAATACCACCAGGCGTTAGAGGCATCAATTTCCAGGAACTTCCCTGATAATGGAATCATTTGTTGCATGAGTCACAACACTGATGGACTATACAGGTATGAATTGGCTAGTGAATTCTTTAATTAA 1365 0.4469 MTVGAGISVADGNLMVLGKRVLSHVHDKVVVTPACGGALLNGAFIGVESHQKGSRTVFPIGKLEGLRFMCVFRFKMWWMTQRMGTCGQEVPIETQFLLVEAQSGSDIDTGEEDQAAATYAVFLPLLEGDFRAVLQGNDRNEIEICVESGCPAVEDFDGTHLVYIGAGSDPFEVITTAVKTVEKHLGTFVHRERKKMPDMLNWFGWCTWDAFYTNVTSENVKQGLQRCFEKGGIPAKFVIIDDGWQSVDMDPNGTEWKSDNAANFANRLTNIKENHKFQKDGKEGQRVEDPALGLRHMTNEIKQEHDIKYVYVWHAITGYWGGVKPGVTGMEHYESKMAFPVSSPGVESNQPDEALATIAINGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIICCMSHNTDGLYRYELASEFFN* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03788 454 Pfam Raffinose synthase or seed imbibition protein Sip1 7 445 IPR008811 -
Phac8g03788 454 PANTHER - 1 445 IPR008811 -
Phac8g03788 454 SUPERFAMILY (Trans)glycosidases 197 449 IPR017853 -
Phac8g03788 454 Gene3D Aldolase class I 199 447 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03788 Phac-Chr8 44041255 44046002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03788 1 444 Glycoside Hydrolase AT1G55740 73.649 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03788 K06617 - gmx:100785506 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g03788 8 44041255 44046002 Phac8g03788 8 44041255 44046002 ECH