Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g03587 ATGGCGCGTTATGATGTTTTTCTGAGCTTTAGAGGGGAAGACACGCGCCTCTCCTTCACGGGTAACCTCTGTGCTGCTTTGCAGCAGGCCAAATTGAGAACTTTCAGGGATGAGGGAATGTTGAAGGGTGGCGACCTTGCACATTCCATCATTGAAGCTATAGAAGCATCCAGGGTTTCCATCGTTGTTCTCTCTGAAAACTTTGCGTTTTCTAGGTGGTGCCTTCAAGAACTTGTCATTATCCTAGACTGCATGAAGACAAAGAACCAAATCGTTATTCCAATCTTTTACAAAGTCGATCCTTCCGATGTAAGGAACCTGGGAGGTAGTTTTGGCGATGCCATGGTTGACCATGAACATAGGTTGGGAAAGCACATCGACAAATTACGAAACTGGAGGTCAGCTTTGACTGAAGTGGCCAATTTGTCAGGATGGTGTTTGGGAAGAGGAAGCAGGTTCGGATATGAATATGAGTACATTGAAAGGATTGTGAGAGACTTGACCTTGAGGCTACCCCGCTATAGTATTTTTCTGAGTTTTAATGGAAAAGATACTCGCTCCTTCTCGGGTTTTCTCTACAATGCTCTGAGCAGAAGTGGATATCATACCATCCTCAATGATGGGGACCAGAGTTCACAATCTACTGTTGGGGTTATGGAAAAATCAAAACTTTCAATCATTGTCTTTTCTGAAAACTATGCACGTTCTGCGTCATGTCTTGATGAGCTTTTGAGGATCCTTGAGTGCAAGGAGATGAAAAACCAACTGGTTTGCCCCATCTTTTACAAAGTGTTACCGTCTGATTTAAGGCATCAAAGAAATAGTTATGGTGAAGCCATGAGTGAACATGAAAATATGATGGGTAAGGACTCTGAGAAGGTGAAGATATGGAGGTCAGCTTTGTTTGAAGTCGCCAACTTGAAAGGATGGTACATGAAAACAGGGTACGAATACGAATTTATTGAAAAAATCGTGGAATTGGCCAGTAAAATTTCTCTGGTGTGA 1005 0.4269 MARYDVFLSFRGEDTRLSFTGNLCAALQQAKLRTFRDEGMLKGGDLAHSIIEAIEASRVSIVVLSENFAFSRWCLQELVIILDCMKTKNQIVIPIFYKVDPSDVRNLGGSFGDAMVDHEHRLGKHIDKLRNWRSALTEVANLSGWCLGRGSRFGYEYEYIERIVRDLTLRLPRYSIFLSFNGKDTRSFSGFLYNALSRSGYHTILNDGDQSSQSTVGVMEKSKLSIIVFSENYARSASCLDELLRILECKEMKNQLVCPIFYKVLPSDLRHQRNSYGEAMSEHENMMGKDSEKVKIWRSALFEVANLKGWYMKTGYEYEFIEKIVELASKISLV* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g03587 334 FunFam Disease resistance protein (TIR-NBS-LRR class) 1 173 - -
Phac8g03587 334 SMART till_3 3 142 IPR000157 GO:0007165
Phac8g03587 334 SMART till_3 173 307 IPR000157 GO:0007165
Phac8g03587 334 PANTHER TMV RESISTANCE PROTEIN N-LIKE 4 147 - -
Phac8g03587 334 SUPERFAMILY Toll/Interleukin receptor TIR domain 172 310 IPR035897 -
Phac8g03587 334 ProSiteProfiles TIR domain profile. 2 171 IPR000157 GO:0007165
Phac8g03587 334 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 145 IPR035897 -
Phac8g03587 334 Pfam TIR domain 174 326 IPR000157 GO:0007165
Phac8g03587 334 Pfam TIR domain 4 167 IPR000157 GO:0007165
Phac8g03587 334 ProSiteProfiles TIR domain profile. 172 332 IPR000157 GO:0007165
Phac8g03587 334 Gene3D - 172 332 IPR035897 -
Phac8g03587 334 Gene3D - 1 171 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g03587 Phac-Chr8 42951118 42952780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g03587 172 331 Miscellaneous Gene Families AT5G44900 26.061 4.41e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g03587 - - var:108337651 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g03587 8 42951118 42952780 Phac8g03587 8 42951118 42952780 ECH