Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02355 ATGCGTGTCACCATCGATCTAGGGTTTTGGAGCCTGATCCTCGTCGCGGTGGTCTGCTTCGTCTTGCCGGCGATCGGCTTCGTGCTCCGTCGCAGATGTCGGCGCGCGGCGGCCAGGGCGGAGGAGATCAAGCGGCTACTTGTTCTCGCCGAGGAGGAGTCCGTTAGAGCCGAGACCGAGGCTTCGTATCACAAATACGGCGCCGTTTCGGTGCCGAAGGACAAAATATGCGCCGTGTGTTTCTGTCCCACCACTACACGTTGCGCGAGGTGCAAAGCGGTTCACTACTGTTCTGGAAAGTGCCAAATTGTTCATTGGCGTCAAGGTCACAAAGATGAATGCCATCCTGCCATCGCAACTTCCCAGACTGATGATTTGGTTAGAGATCTGGGAAAGAAGGTAGCAGATCCAGACTACCGTGGAATCCATGAACAGAGGTCTCAGACTGAAAGCACAGAATATGCAACATCATCTGAGAATCCCCTGTTGTCTGAAAAGAGCTGTTCTAATATTTCACAGGCAAAGGATGATAGTGCAAGAGACGAGTCTCTTCAAGAGGGAAATGTTGCAGTCTCTAATTCTGAATTGTCTAGTAATTCATTCTCTGGATTCTCAGCTTCGACTGGTGCCAGTGAATCATCTGATGATTCTTCTGTCTGTGAGAGTATCATCTCAAATGAGCATGAGAGATCTGAGGGACATATTTTTGTGGATCATGACACTTCTGATACCACTTCAAGTTATAACAACATTGATGAATCCATTCCATTATCACCTAAGTTTGTTGGTTTGGTCGATTCGGTTGATGATTATCCAGCAATGCATAAATTATATCGAGTTACACCTGGTTTGGGCAAAGAAGAGAGTAAGCTCACATCATCAGATGGTAGTTTTGGTTTGCGTATGCGGAAAGGGGTAACAATTGAGCCTTCCACAGTGTCTTCTGGATTCTGGGACAAAACTCTTGATTCAAAAAGGTTAAAAGATGACTCTAATAGTGACCCTCTTCCATCCCAAGGTGATTCTCTTCCAAAGTCAGTTGAGAACAATATGCCACGTGCAGGATTATCATCTTCAGAGAAAGATGTTGTTGATTCTTCAGATTGTGCCGATGCTTTGAGCATCCATAATTTGCAAACAGTTGGTTCTAGGGTATCAAATCATGTTATCAACCCAGGTAGCACCTTGGAGTTAGCTGGAAGTATAGATCTGCCACATGCATTTGCTGATACTAAGTTAGTTTCTAGAACGGAAGAACATTCACATTATAGTACAAAATGTAGGAATAGTGGCATCCAATCTGGCACTGTTACTTCATCTCGGGTTGTTAGCTCTCCAAAGTCTAAGAATGACCTGAAAACATCTGTTCTGAAAGCTTCTGATCAGTTTAGAGGATCAAAATCATCTAAACCCTTTCCATTAGCTGTTGGGAGTAATATTACTGGAAAATACAGTGACAAGGGTCATTTTCCATATGATTTGTTTGTCAAGCTTTTTAACTTGAACAGAGTGGAGTTGCAACCATTTGGTCTTATAAACTGTGGAAACAGCTGTTATGCTAATGCTGTACTCCAGTGCTTGGCTTTTACACCGCCCCTGACTGCTTATTTACTTCAAGGACTTCATTCTAAATCATGTGAAAATAAAAAGTGGTGTTTCACCTGTGAGTTTGAAAGTTTGATTTTGAAGTCAAAAGACACAAAATCTCCCATCTCACCTGTGGGCATACTCTCTCAACTACAGAATATTGGGAGTCAACTTGGTAATGGAAGAGAAGAAGATGCACATGAGTTTCTAAGGCTTGCTGTTGAGACAATGCAATCTGTTTGCCTTATGGATTCAGGGGATAATACATCAGACTCATTAAAAGAGGAAACCAATTTGATGGGCCTAACTTTTGGAGGTTATCTCCAATCAAAGATAAAATGCATGAAATGTGGAGGGAAATCTGAGCGTGAAGAAAGAATGATGGATCTAACTGTTGAGATAGATGGGGAGATAGCAACCCTGGAGGATGCCCTTCGACAGTTTACAACTGCTGAGACTCTGGATGGGGAAAACAAGTACCACTGTGTCAGATGCAAGTCTTACGAGAAGGCCAAGAAGAAAATGACAGTTTTGGAGGCACCTAATGTTCTTACAATTGCATTAAAGAGATTTAAGACAGGAAAATTTGGCAAGCTCAATAAACCTATCCAGTTTCCTGAAATACTTGACTTGGCACCTTTTATGAGTGGAACTAGTGATTTGGCTATATACAGGCTATATGGGGTAGTTGTGCACCTGGATACAATGAATGATGCTTTTTCGGGTCACTATGTATGCTATGTGAAGAATTTTCAAAGCAGGTGGTTCAAGGTTGATGATAGTGTGGTGACATCTGTTGAATTGGAAAGCGTCTTGGCAAAAGGAGCATACATGCTTTTTTATGCAAGGTGCTCACCTAGGGCCCCAAGATTAATCAGGGACAGTATAGTATATTCTGATTCAAAATGGAAACTAAATGGAAAAAGTGCCATAATGAAGAGACGACTATCTCCAGTTTCTGGTGCTAGAGTTAATTTGACTTCTGCCGATGGTTCACCCTCCTTGGATGATGCTATCTATTCAAAGTTTCTCCACCAGAGAAGGATTTTGGAAGAAGATTTATCAAGCGATAATTCATCCCTTATCAGCAGCAATTCTGATGAAGGTTCCTGCAGTACAGATTGCACTAGTGATTCAACCAGTACAGATGACTTTGCTGATTATATTTTTGGTGATTTAGGACGCGGCTCTGGTGGCATGTTAAGAAATTCAGATTCGAACATTTCCCCTGCATTGTCGTCTTCTCCCCACTCTAGATATTTTCCCTCTTCTGATATAGACCCACATGATTCAGTTTTGCTACATCCGACTGGGTTCCAACCACCCCTTCCCCAGGTTAAAAGGTGGAGATAG 2940 0.4255 MRVTIDLGFWSLILVAVVCFVLPAIGFVLRRRCRRAAARAEEIKRLLVLAEEESVRAETEASYHKYGAVSVPKDKICAVCFCPTTTRCARCKAVHYCSGKCQIVHWRQGHKDECHPAIATSQTDDLVRDLGKKVADPDYRGIHEQRSQTESTEYATSSENPLLSEKSCSNISQAKDDSARDESLQEGNVAVSNSELSSNSFSGFSASTGASESSDDSSVCESIISNEHERSEGHIFVDHDTSDTTSSYNNIDESIPLSPKFVGLVDSVDDYPAMHKLYRVTPGLGKEESKLTSSDGSFGLRMRKGVTIEPSTVSSGFWDKTLDSKRLKDDSNSDPLPSQGDSLPKSVENNMPRAGLSSSEKDVVDSSDCADALSIHNLQTVGSRVSNHVINPGSTLELAGSIDLPHAFADTKLVSRTEEHSHYSTKCRNSGIQSGTVTSSRVVSSPKSKNDLKTSVLKASDQFRGSKSSKPFPLAVGSNITGKYSDKGHFPYDLFVKLFNLNRVELQPFGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKSCENKKWCFTCEFESLILKSKDTKSPISPVGILSQLQNIGSQLGNGREEDAHEFLRLAVETMQSVCLMDSGDNTSDSLKEETNLMGLTFGGYLQSKIKCMKCGGKSEREERMMDLTVEIDGEIATLEDALRQFTTAETLDGENKYHCVRCKSYEKAKKKMTVLEAPNVLTIALKRFKTGKFGKLNKPIQFPEILDLAPFMSGTSDLAIYRLYGVVVHLDTMNDAFSGHYVCYVKNFQSRWFKVDDSVVTSVELESVLAKGAYMLFYARCSPRAPRLIRDSIVYSDSKWKLNGKSAIMKRRLSPVSGARVNLTSADGSPSLDDAIYSKFLHQRRILEEDLSSDNSSLISSNSDEGSCSTDCTSDSTSTDDFADYIFGDLGRGSGGMLRNSDSNISPALSSSPHSRYFPSSDIDPHDSVLLHPTGFQPPLPQVKRWR* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02355 979 MobiDBLite consensus disorder prediction 333 363 - -
Phac8g02355 979 MobiDBLite consensus disorder prediction 139 198 - -
Phac8g02355 979 MobiDBLite consensus disorder prediction 324 363 - -
Phac8g02355 979 Gene3D Cysteine proteinases 502 822 - -
Phac8g02355 979 Gene3D - 67 120 - -
Phac8g02355 979 FunFam Ubiquitin carboxyl-terminal hydrolase 15 68 118 - -
Phac8g02355 979 ProSitePatterns Zinc finger MYND-type signature. 77 114 IPR002893 -
Phac8g02355 979 MobiDBLite consensus disorder prediction 886 908 - -
Phac8g02355 979 ProSiteProfiles Zinc finger MYND-type profile. 77 114 IPR002893 -
Phac8g02355 979 SUPERFAMILY HIT/MYND zinc finger-like 74 117 - -
Phac8g02355 979 FunFam Ubiquitin carboxyl-terminal hydrolase 15 503 821 - -
Phac8g02355 979 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 230 816 - -
Phac8g02355 979 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 510 525 IPR018200 GO:0004843|GO:0006511
Phac8g02355 979 MobiDBLite consensus disorder prediction 930 950 - -
Phac8g02355 979 SUPERFAMILY Cysteine proteinases 505 816 IPR038765 -
Phac8g02355 979 MobiDBLite consensus disorder prediction 148 174 - -
Phac8g02355 979 Pfam MYND finger 77 114 IPR002893 -
Phac8g02355 979 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 509 813 IPR028889 -
Phac8g02355 979 Coils Coil 33 60 - -
Phac8g02355 979 Pfam Ubiquitin carboxyl-terminal hydrolase 509 810 IPR001394 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02355 Phac-Chr8 32830291 32837469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02355 411 817 Miscellaneous Gene Families AT4G31670 45.763 2.36e-119 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02355 K11855 - gmx:100782303 1411.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02355 8 32830291 32837469 Phac8g02355 8 32830291 32837469 ECH