Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02330 ATGAGAGAGAACCATCCTTCCACAAACTCCGATGACGACCAGCGATCCTCCCTGCTGGATCTGGCGCGCGCCGAAATCTCCTCCAACTCCAAGACCCGAAACTACGGCGGGTTCCCGGATCCGGGTTCCGGGTCGGGTCCATCGGAGCCTCAGGCTCCGTTCCCGGACCAGGTCCTGGAGAACGTGCTGGAGAACGTGCTCCACTTCCTCTCCTCGCGCCACGACCGCAACGCCGCCTCATTGGTGTGCCGCTCCTGGTACCGCGCGGAGGCCCTCACCCGATCCGAGCTCTTCATCGGGAACTGCTACGCGCTCTCTCCGGCCCGCGCCACCACGCGTTTCACGCGCGTCAAGTCCGTCACCGTCAAGGGCAAGCCGCGCTTCGCGGACTTCGATCTGATGCCCCACGATTGGGGTGCCAACTTCGCGCCTTGGGCCTCCGCCCTGGCCCAGGCCTACCCCTGGCTCGAGAAGCTCCATCTCAAACGCATGAACGTCTCCGACGCCGACCTCGCCCTCCTCGCCGACTCCTTCTCCACCTTCCGCGAACTCGTCCTCGTCTGCTGCGAGGGCTTCGGCACTCCCGGCCTCGCCAACGTTGCTGCCAAGTGCAGACTGCTGAGGGTGCTTGAGCTGGTGGAATCTGTAGTGGAGGCTGAGGACGATGAGGAAATAGATTGGATTTCTTGTTTTCCCGAGAGCCAAACCAACATGGAGTCTCTTGTGTTTGATTGTGTTGAGTGTCCTATTAATTTCGAGGCTTTGGAGAGCTTAGTGGCTAGGTCGCCTCGTTTGAAGAAGCTTCGGTTGAACCAATTTGTTTCCATGGCTCAGCTCCATCGTTTGCTGCTACGAGCCCCGCAGCTTACTCACCTGGGAACAGGCTCCTTCAGTGCTACTGAGCCCGGGGTGGTCGGCGAACTGGAACCGGATTACACGGCAGCGTTTGAGGCCTGCAGATCCTTGGTTTGCCTGTCTGGATTCAGGGATATTTGGGCGGACTACCTTCCCGCGATTTATCCGGTCTGCGCCAATCTGACCTCGTTAAATTTGAGCTATGCCGATGTTAACGCGCATCAGCTGAAGGCAGTTATTCGCCTCTGTCATAAGCTGCAGATATTCTGGGTACTTGACTCGATATGTGATGAAGGACTTCAAGCAGTGGCTGCTACTTGCAAGGACTTGCGTGAGCTTCGGGTTTTTCCTGTGGATGCAAGTGAGGAGACTGAAGGGCCTGTCTCTGAGGTGGGGTTTGAAGCGATTTCGCAGGGTTGTAGGAAGTTGGAATCGATTCTGTATTTCTGCCAGAGGATGACTAATGCAGCTGTGGTGGCTATGTCCAAGAACTGCCCAGATCTTGTGGTGTTTCGTTTGTGTATTATTGGGCGGTATAGGCCAGATCCTGTGACTCAGGAACCCATGGACGAGGGTTTTGGTGCTATTGTTATGAATTGCAAGAAGCTCACTAGGCTAGCTGTGTCTGGTTTGCTGACTGATCGTGTTTTTGAGTACATTGGGAGGTATGGGAAATTGGTTAGGACACTGTCGGTTGCCTTTGCTGGGGCCACCGACATGGGTCTTAAGTATGTGCTTGAAGGATGCCCTAATTTGCAAAAGCTTGAAATCAGGGATAGTCCTTTTGGGGATGGGGCTCTGCGATCTGGTTTGCATCATTACTACAACATGAGATTCCTTTGGATGTCGTCCTGTAGATTGACGCGCCAAGCTTGCCAAGAGATTGCACAAGCATTACCCAACCTGGTCTTGGAAGTTATCAACGAGAACGGTGAGGAGTATGCAGGTGAGGATATTGAGATATTGTACATGTATCGGTCACTTGATGGGCCGCGGGATGATGCCCCAAGATTTGTTAGCATCCTGCATTAG 1887 0.5458 MRENHPSTNSDDDQRSSLLDLARAEISSNSKTRNYGGFPDPGSGSGPSEPQAPFPDQVLENVLENVLHFLSSRHDRNAASLVCRSWYRAEALTRSELFIGNCYALSPARATTRFTRVKSVTVKGKPRFADFDLMPHDWGANFAPWASALAQAYPWLEKLHLKRMNVSDADLALLADSFSTFRELVLVCCEGFGTPGLANVAAKCRLLRVLELVESVVEAEDDEEIDWISCFPESQTNMESLVFDCVECPINFEALESLVARSPRLKKLRLNQFVSMAQLHRLLLRAPQLTHLGTGSFSATEPGVVGELEPDYTAAFEACRSLVCLSGFRDIWADYLPAIYPVCANLTSLNLSYADVNAHQLKAVIRLCHKLQIFWVLDSICDEGLQAVAATCKDLRELRVFPVDASEETEGPVSEVGFEAISQGCRKLESILYFCQRMTNAAVVAMSKNCPDLVVFRLCIIGRYRPDPVTQEPMDEGFGAIVMNCKKLTRLAVSGLLTDRVFEYIGRYGKLVRTLSVAFAGATDMGLKYVLEGCPNLQKLEIRDSPFGDGALRSGLHHYYNMRFLWMSSCRLTRQACQEIAQALPNLVLEVINENGEEYAGEDIEILYMYRSLDGPRDDAPRFVSILH* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02330 628 MobiDBLite consensus disorder prediction 11 36 - -
Phac8g02330 628 SUPERFAMILY RNI-like 149 592 - -
Phac8g02330 628 Pfam Transport inhibitor response 1 protein domain 116 161 IPR041101 -
Phac8g02330 628 FunFam Transport inhibitor response 1 95 627 - -
Phac8g02330 628 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 135 581 - -
Phac8g02330 628 MobiDBLite consensus disorder prediction 1 55 - -
Phac8g02330 628 Gene3D - 50 94 - -
Phac8g02330 628 Pfam F-box 56 95 IPR041567 -
Phac8g02330 628 CDD F-box_AtTIR1-like 56 94 - -
Phac8g02330 628 SUPERFAMILY F-box domain 54 89 IPR036047 GO:0005515
Phac8g02330 628 Gene3D Ribonuclease Inhibitor 96 627 IPR032675 -
Phac8g02330 628 FunFam Transport inhibitor response 1-like protein 49 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02330 Phac-Chr8 32201526 32206051 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02330 - - gmx:100807836 1071.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02330 8 32201526 32206051 Phac8g02330 8 32201526 32206051 ECH