Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02254 ATGGCTATGTGCTTCTCACTTTTGACTGTAAGGAAGGAGAAATACAAGGGGAGTGGAAGAAGGTCTTCAAAGGAGGACTTTAGCACTCTACTTGCCAAGCTACAATCTTCAAAAATAGCATCAGTGCCAACCACTTTTGATGTCACGGTATCGAATGGTATCCCGAAAAATTCAAGTTTCAATTCGGGGGTTACGAGTCTTGATACTTGTGTTGAGCCTGAAGTACAGGAGGCTTATGAAGAGGAAGATGAGAATGAATATTCACCGAAGATCAAGAGGGTACTCTCTGATTTTCATGTCCAAGATCATGAAGCTGTTGAAGGCAAAGGATATGATGCAACTGATAAAGAGATAGAGTATCCCATTTTATATGAAAATCAAGTCATCGAAGAATTGGATGACAGAACCGATAAATACAGCCAAAAGAGTGTTGAAACAACCGAAAGTGGACACGTCAGTGATCCTGGGATTGGCAAAGCTGATTTCTGGACTTCTCCAAAGTTCAAGAGACACTTCTCTAACCTTGAAAAGTTTGATGAGCATGGGAAGAAAACTCATTATTTGTCAGCTTTGAAGTCAAAGTATTTTGAGAATTTTAAGGAAATAGCAGCAATGATTGATCTTGAAAGCCCTATGTCAGTGATGAGTCACTACAGTGCTGATAGAGTAATGCTGAAAAGGCATTCTTCATGTCAGGTGCTTCCTTCTGGAAGAAAAAAGTTGTGGTGGAAGATGATCCTGTGGAGCCACAGGAACATACATGGAGCTTTCTCTAGTGATTCAACACTAGTTCCTGCTAATGCTGCTTTAAATAGTGGGTACTCTTCAGACACCATTGAACCAAAACAAGGAAAGACATTGAGGTCTGTGACATCTTCTGGTTCTGTTACTGTGGAATCCCATAACAAAAGAAGAACTGGTAAAAATATAGATAATCAAAGGGGGAGCAGGTTTCAAAGTGACCGATGGATTGCTTTCTCCAAAGAATCATCCTCTTTTGCCAGAGTGGATGCATGGGTGAAAGGTCTTGAATTTCAGCCACTAATTCCTGAGGATGATTTTAATGTTAACAATGGCAGAAGCATTCCCTTCCCACCTTCTCCAGATACTGGTGGAACAATGATTAGAGCAACATCTCAGTTGACTTATTCCGATGCCAATGCTTCAAAAGAGACTTTAACTGCCATTAGTCTAGTCCAGTCTCTAAATCCAGCTTCATCTATTGCTCACATATCTGGTATTAGTGTAAAAACCATCCCTGCTATTTCACACTTATCCAATCTTCGCTCTATCAACCTGTCAAACAATTTCATAGCTCACATCTCACCAGGATTTCTACCAAAGGGTATTCAAACACTTAACTTGTCAAGAAACAAGATCAGCACTCTTGACGGCCTCAGAGAATTGACCAAGTTGCGGGTAATTGACCTAAGTTACAACCGCATCTCGAGAATTGGACAAGGTTTGTCAAGTTGCACACTTGTCAAAGAACTATATCTTGTGGGGAACAAGATAAGTGATGCTGAAGGGCTACACAGGCTATTGAAGCTAACGGTTCTAGATTTGAGCTTCAACAAGATCACAACAACAAAAGCATTAGGCCAGCTAGTGGCTAGCTACAACTCACTTAAGGCTCTTAATCTGCTGGGAAATCCGATTGAAAGCAACATCAACCATGGCCAGCTAAGTAAAGCAGTCTCTGGTCTTCTTCCAAAGTTGGTGTACCTGAACAAGCAACCCCTCAAGGCTCATAGCACACGCGAAATATTAAGTGACAGTGTTGCCAGAGCTGCCCTTGGGAGCAGCACGCGAAGCTGTCACAAAAGATCAATAAGAAGACTTAGCCAGGGAGGATCAAGTATTTCCAAAGGGTATAGAAGAAGTTCAAGTGGTTCCCAAAAAAGCACGAACCGAACAAGGAGGTGA 1926 0.4159 MAMCFSLLTVRKEKYKGSGRRSSKEDFSTLLAKLQSSKIASVPTTFDVTVSNGIPKNSSFNSGVTSLDTCVEPEVQEAYEEEDENEYSPKIKRVLSDFHVQDHEAVEGKGYDATDKEIEYPILYENQVIEELDDRTDKYSQKSVETTESGHVSDPGIGKADFWTSPKFKRHFSNLEKFDEHGKKTHYLSALKSKYFENFKEIAAMIDLESPMSVMSHYSADRVMLKRHSSCQVLPSGRKKLWWKMILWSHRNIHGAFSSDSTLVPANAALNSGYSSDTIEPKQGKTLRSVTSSGSVTVESHNKRRTGKNIDNQRGSRFQSDRWIAFSKESSSFARVDAWVKGLEFQPLIPEDDFNVNNGRSIPFPPSPDTGGTMIRATSQLTYSDANASKETLTAISLVQSLNPASSIAHISGISVKTIPAISHLSNLRSINLSNNFIAHISPGFLPKGIQTLNLSRNKISTLDGLRELTKLRVIDLSYNRISRIGQGLSSCTLVKELYLVGNKISDAEGLHRLLKLTVLDLSFNKITTTKALGQLVASYNSLKALNLLGNPIESNINHGQLSKAVSGLLPKLVYLNKQPLKAHSTREILSDSVARAALGSSTRSCHKRSIRRLSQGGSSISKGYRRSSSGSQKSTNRTRR* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02254 641 Gene3D Ribonuclease Inhibitor 369 490 IPR032675 -
Phac8g02254 641 ProSiteProfiles Leucine-rich repeat profile. 449 470 IPR001611 GO:0005515
Phac8g02254 641 ProSiteProfiles Leucine-rich repeat profile. 427 447 IPR001611 GO:0005515
Phac8g02254 641 FunFam Protein phosphatase 1 regulatory subunit pprA 386 567 - -
Phac8g02254 641 SUPERFAMILY Outer arm dynein light chain 1 415 579 - -
Phac8g02254 641 SMART LRR_sd22_2 514 535 - -
Phac8g02254 641 SMART LRR_sd22_2 492 513 - -
Phac8g02254 641 SMART LRR_sd22_2 469 491 - -
Phac8g02254 641 SMART LRR_sd22_2 447 468 - -
Phac8g02254 641 MobiDBLite consensus disorder prediction 612 641 - -
Phac8g02254 641 Pfam Leucine rich repeat 426 482 IPR001611 GO:0005515
Phac8g02254 641 ProSiteProfiles Leucine-rich repeat profile. 516 537 IPR001611 GO:0005515
Phac8g02254 641 SMART LRR_typ_2 514 536 IPR003591 -
Phac8g02254 641 SMART LRR_typ_2 469 492 IPR003591 -
Phac8g02254 641 SMART LRR_typ_2 425 447 IPR003591 -
Phac8g02254 641 ProSiteProfiles Leucine-rich repeat profile. 471 493 IPR001611 GO:0005515
Phac8g02254 641 Gene3D Ribonuclease Inhibitor 491 586 IPR032675 -
Phac8g02254 641 PANTHER NISCHARIN RELATED 199 635 - -
Phac8g02254 641 MobiDBLite consensus disorder prediction 292 314 - -
Phac8g02254 641 MobiDBLite consensus disorder prediction 605 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02254 Phac-Chr8 30659589 30663337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g02254 420 612 Receptor kinase-like Gene Family AT5G56040 30.806 5.97e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02254 - - gmx:100801034 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02254 8 30659589 30663337 Phac8g02254 8 30659589 30663337 ECH