Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g02244 ATGCAGAAGAAGCTAGGATTCCCAATCTCCAAGAGTCTGGACCAATTCAAATCGTTGTACGGTTCCATTTCGGGAACTTCCAAGCCATTATCTGCGCGTCCTTCTGTGGATTCCATTTCATCGGGAAGTTTTGCAAACCTGAAGCTCACCGCAGAGAAATTGGTGAAAGAGCAAGCTTCGGTGAAGACTGATCTTGAAAATGCGAATGCTAAGCTTAAGAAGTCGCAGGAGTGTGTGAATGCATTGGAAGAAAAATTGCAGAATGCTTTAAACGAAAATGCCAAGCTCAAGGTCAAGCAGAAGGAAGAGGAGAAACTGTGGAAGGGATTGGAGTCTAAGTTCTCTTCTACTAAGACTTTCTGTGATCAACTTACTGAGACTTTACAGAAGTTGGCTGGTCTAGTTCAGGATGCCGAAAAAGATAAGGAGACATTGGAAAATAAACTGTCAGCAAGTTCAGAAGCTCTTGATAGCTTGAATAAACAAATGGATGGTTTGTCTTTGAAGCTAGATTCTGCACAGGAAACAATTAGAACCCGTGATAACGAGCTAGAGAAGCTCAAACTTGCTTCAGAAGAAAAAGAGAAATTTCACAGAGATGATCTTTGCAGAGTTGCCAATGTTGTACAAGAGAAAGATAATATGATAAGGAATTTAGAAGAAATGTTAACATCTAGTAGATTGGCTACAGAGAATTTGAACTCAAAATTGGAAGATGTTCACCTTCAGTTAAAAGTTAAAGAAGATGAAATTATGCATCACATAACCAGTCAAGAGAAATTGGAGAAGGAAAAGAGTGATCTTCAATTGTTGAATGCTGGGCTTGAAGAAAAGCATGACATGTCACTTCAGGAAATTGAAAATCTTAAAGAAACACTTCAGTCATTGGCTGCACATTTGTCAAATTTAGACAAAGAAAGCCTGAATCTTTTGAGCAAGTTTGATGAAATGAATTTACTCTATGCTTCTTGCTTCCAGTTGGTTCAGAAGGAGAGAGAAACTTTCTCAAAACATGCTCAATACCTGTATAGTGAGCTTAATAATAAATTTGTGGTCTTGGAATTAGAAAAGAATGCAACTCAAATGAAAAATCTTGAGTTAAGCAAAACTGTGGATGAACTTCAGAAAGTTCAAGAATCTACTGTAGCCCGACTTACGGAGGACTCTCGATTAGCTGCTGAGAGAATTCAAAGTTTGGTGTCAGAAACTGAGACTTTAATCTCAAAAAAGAAAGAAGCAGAGGTATTAATTTCCAAATTAGAAGAGAAAGCTGAATGTCTGTTAGAAAGTTCTAGATCATCAGACAACCACGTGCAAGACTTGCTGCTGAAGGTTTCAGCATTAGAGACTGAAAGCAAAGAAAACACAGAAAGACTGCAGGCAGAGATATTGAAGAAATCAGAGGAAATAGATACTTTGCAAAAGGAGAGAATAAAACTAGAGCAGCATGCCGATTCTCTTGATCAAGAAGTAATCCAGCTTCATAATGTCCTGGAGGAAAAGGAACAGCGTGTTTTACATTATAAGGAACAGGAAAAGAAGCTAGAAGATCAAATCACAGAGAACATATCATTATTGAATGCTGTTGAAAGCAAACTTTCAGAAGCTAGAAAGCAATATGATCAAATGGTAGAGAATAAACAGTTAGAACTATCAAGGCATTTGAAAGAAATATCTCAGAGAAATGATCAGGCTATCAATGAAATTAAGAGGAAGTATGAATTGGAGAAGATGGAAATTGTCAATATGGAAAAAGACAAGACAGACAAAACTATTGCCGAAATTGAGGGAAGGTGTGATAAAAAACTTGCAGAATGCAACGAAGAATCAAAGCAGCAGTTGATGCGCATTCAGGAGGAACACACGTTGCTGGTTACTCAAATGCGGGAGGAGCATGACAAGAGGCAACTAAGTCTCATAGCTGAACACGATGAACAGCTACAGCGTACCCAACTGCAGGCCGAAAAAGAACTGAGAGAGAAAACAATGTTTATGAGGAATGATCATGAAGCTCAGATTAAAGCATTGAGGTGTGAACTTGAAGATGAGTGTCGGAAGCTGGAAGAGGAGTTGCATCTTCAAAAATCCAAAGAAGACAGGCAAAGGGCTTTGTTGCAGTTGCAGTGGAAAGTGATGAGTGACAAACCCAAAGAGGACCAAGAAGTGAATTCAAAACAGGATTACTCCATTTCATCAATTAAGAGAAGGAGTTCTTGTGGTGGCAAAAGAAATCTGCAGCATGACGTAGACTCTCCTTACTTTGAAGCAGCACAAACACCAGTACCAAAGTTGTTGAAAAAAGTGGACAACATTAAAACAGGAAGTGCAGTGAATATTCCTAAGAGTCATAGAAAGGTGACTTTCTTTACTATGAATTAA 2379 0.3842 MQKKLGFPISKSLDQFKSLYGSISGTSKPLSARPSVDSISSGSFANLKLTAEKLVKEQASVKTDLENANAKLKKSQECVNALEEKLQNALNENAKLKVKQKEEEKLWKGLESKFSSTKTFCDQLTETLQKLAGLVQDAEKDKETLENKLSASSEALDSLNKQMDGLSLKLDSAQETIRTRDNELEKLKLASEEKEKFHRDDLCRVANVVQEKDNMIRNLEEMLTSSRLATENLNSKLEDVHLQLKVKEDEIMHHITSQEKLEKEKSDLQLLNAGLEEKHDMSLQEIENLKETLQSLAAHLSNLDKESLNLLSKFDEMNLLYASCFQLVQKERETFSKHAQYLYSELNNKFVVLELEKNATQMKNLELSKTVDELQKVQESTVARLTEDSRLAAERIQSLVSETETLISKKKEAEVLISKLEEKAECLLESSRSSDNHVQDLLLKVSALETESKENTERLQAEILKKSEEIDTLQKERIKLEQHADSLDQEVIQLHNVLEEKEQRVLHYKEQEKKLEDQITENISLLNAVESKLSEARKQYDQMVENKQLELSRHLKEISQRNDQAINEIKRKYELEKMEIVNMEKDKTDKTIAEIEGRCDKKLAECNEESKQQLMRIQEEHTLLVTQMREEHDKRQLSLIAEHDEQLQRTQLQAEKELREKTMFMRNDHEAQIKALRCELEDECRKLEEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISSIKRRSSCGGKRNLQHDVDSPYFEAAQTPVPKLLKKVDNIKTGSAVNIPKSHRKVTFFTMN* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g02244 792 Coils Coil 121 190 - -
Phac8g02244 792 Coils Coil 640 660 - -
Phac8g02244 792 Coils Coil 666 686 - -
Phac8g02244 792 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 26 727 - -
Phac8g02244 792 SUPERFAMILY Tropomyosin 79 298 - -
Phac8g02244 792 Coils Coil 526 546 - -
Phac8g02244 792 Coils Coil 230 250 - -
Phac8g02244 792 Coils Coil 403 430 - -
Phac8g02244 792 Coils Coil 555 586 - -
Phac8g02244 792 Coils Coil 258 306 - -
Phac8g02244 792 Coils Coil 51 106 - -
Phac8g02244 792 Coils Coil 456 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g02244 Phac-Chr8 30467379 30474568 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g02244 - - gmx:100788684 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g02244 8 30467379 30474568 Phac8g02244 8 30467379 30474568 ECH