Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01168 ATGCCGACTCTAAGAATTCATGGATATGCCTTTGCTGTTTTGTGTTGTTTTATCATCCTCACAGAAGCTTCACAAACAGATCCTTCAGAAGTAAATGCACTGATAGACATCAAGAAAAGTTTGATTGATCCTAAGAACAATCTGAGGAACTGGAATTCGGGTGACCCGTGTATGGCAAACTGGACTGGGATTTATTGTTCTGATAGGGAGGAGGCTGATGGTTACTTCCATGTTCAAAAGCTCTACTTAATGACTATGAATCTCTCGGGAAGTTTAGCACCCCAGCTTGGTCAGCTATCTCATCTTAAGATACTGTCTTTTATGTGGAACAGTTTGACAAGCACAATACCGAAGGAAATTGGAAATATCTTGTCATTGGAACTCTTGCTCCTAAGTGGGAATAAGTTATCTGGTAGTTTACCAGATGAACTTGGCAAACTTTCGAATTTGGATAGACTCCAAGTTGATGAAAATCAATTGTCAGGAACTATTCCAGAGTCATTTGGCAACATGGTCAAAGTTAAACATCTCCACATGAATAACAACTCGTTCTATGGTCAACTTCCTTCCACACTTTCAAAGCTGTCTAATCTTGTGCATTTGCTTGTGGACAACAATAACTTATCTGGTTACCTTCCATCAGATTTCTCTGTGTTACAACGGTTAAGAATACTCCAACTTGATAACAATAATTTCAATGGGCATGAAATTCCTTCTACCTATGAAAACTTCTCCGCTCTAACGAAACTAAGTCTGAGAAACTGCAGTCTGCAAGGAACTATTCCTGATTTCAGTTCAATAACCAACCTTATCTATTTAGACCTTAGCTGGAATCAGTTTACTGGAACTATACCATCAAATAAACTTGCAGACAATATGACTACTATTGATCTATCCAATAATTTTCTCGAAGGACCAATTCCTCTGAGCTTCATATACCCTAGGCTTCAAAAACTGTCACTTGAGAACAATTCTCTAAATGGATCAATCCCTGCTAGCATATGGCAGGACAGGGCATTCATTACTAAAGATAAACTTAAAATTAATCTCGAAAATAACTCGCTAGTCGACGTTTTGGGAAATCTGAACCCCCCAGCAAATGTTACCTTGAGGCTTTCTGGCAATCCAATCTGCGAGAATTCTAACAAAGAAAATATTGGTCAATATTGTGAACCTGGTGGAGATGAAGATGAAGATGAAGTAGTCCAAAACCCAAAAGATCCATCAAGTGTCTGTCTATTGCTAGATTGCCAAGTAGATAAGTCCTATGAATTATATGTACCCTCTTTCCCAATTCCTTGCTATTGTGCAGCTCCTCTGATAATTGGATACAGGCTGAAAAGTCCAAGTTTTTCATACTTTGCTCCCTATTTTGTAATGTTTGCATTATATATAACTGATTCCTTAAACTTAGAACACTATCAAATATCAATATCTTCTTGGGAAGATGGAAACCGTATCACCATGTATTTAAAACTATTCCCTTCGTATGATTCCCACTTAGATATGTTCAACGAAAGTGACGTCTATCGCATTAAAACCAAATTTACATCATGGGAATTTCCTCCCAATCATTTCTTTGGACCATATGAACTCCTGAACTTCACTCTTGTTGGACCTTATGCAACTACTATTGGTTCAAAAAGGAGTACACTTAATTCAGTCATATTGCTTGCTGCTATATTATCAGCTGTTGCCAGTATTTTAGCAACATCTGCTGTGATCATTTTCCTGCTTTATAGAAGACATGGAAAATATCAGCACAAGAGTTCAAGGAAACATAAGTCCCCTAATGTACATATTAAAATAGACAGTGTGAAAGAATTTAGTTTCATAGAACTGGCTATTGCTACGAACAATTTTAGCAGCTCAACTATAGTTGGCAAAGGAGGTTATGGGGATGTTCATAAAGGCATTTTATCTGGTGAAACACTAGTGGCTATTAAACGAGCAGCAGAAGGTTCCTTACAAGGCCAAAAGGAGTTTTTGACTGAGATTGAACTTTTATCAAGGTTACATCATCGAAATCTTGTCTCACTGATTGGATACTGCAATGAAGAAGAGGAGCAGATGTTGGTTTATGAATTCATGCCCAATGGCACCCTAAGGGACTGGATTTCTGGTAAAAGTGAAAAAGCCAAGGAAAGACAAAATTTTGGTATGGGATTGAAAATTGCATTGGGTGCAGCCAAAGGCATACTATATCTTCATACAGAGGCTAACCCTCCTATATTCCACCGAGATATTAAAGCCAGCAACATACTTCTAGACTCCAAATTTACAGCTAAAGTGGCTGATTTTGGACTTTCACTGCTTGCACCAGAAGGATCTGGTGCTAAACTGTCAACTGTTGTGAAGGGAACACCAGGTTACCTTGACCCAGAATATGTATCGACTCAGAAGTTTACTGACAAAAGTGATATCTATAGTCTAGGAATTGTGTTTCTGGAGCTTTTGACAGGCATGCAGCCAATCTCACGTGGGAAACACATTGTTAATGAGGTTAATGCGGCTTGTCGATCTGGCCTGATATATTCCGTTATAGAGAACAGAATGGGGTTATATCCATCACATTGCTTGGACAAGTTTTTATCTCTGGCCCTCAGATGTTGCCAAGATAAACCAGAAGAGAGGCCATCAATGGTAGACGTGGTGAGGGAACTAGAAGATATTGCTGCAATGCCATCAAGAAGTCATGAAGCTAGTTTCCCAGATGTTAGCATAGATAACTCAGGTGAAATGGCAAGGGAGGATCAACACAAGTACGCGCATGTGTCAGGAAGTAATCTTGTCAGTGGTGTCATTCCCACCGTTGTTCCTCGCTAA 2826 0.39 MPTLRIHGYAFAVLCCFIILTEASQTDPSEVNALIDIKKSLIDPKNNLRNWNSGDPCMANWTGIYCSDREEADGYFHVQKLYLMTMNLSGSLAPQLGQLSHLKILSFMWNSLTSTIPKEIGNILSLELLLLSGNKLSGSLPDELGKLSNLDRLQVDENQLSGTIPESFGNMVKVKHLHMNNNSFYGQLPSTLSKLSNLVHLLVDNNNLSGYLPSDFSVLQRLRILQLDNNNFNGHEIPSTYENFSALTKLSLRNCSLQGTIPDFSSITNLIYLDLSWNQFTGTIPSNKLADNMTTIDLSNNFLEGPIPLSFIYPRLQKLSLENNSLNGSIPASIWQDRAFITKDKLKINLENNSLVDVLGNLNPPANVTLRLSGNPICENSNKENIGQYCEPGGDEDEDEVVQNPKDPSSVCLLLDCQVDKSYELYVPSFPIPCYCAAPLIIGYRLKSPSFSYFAPYFVMFALYITDSLNLEHYQISISSWEDGNRITMYLKLFPSYDSHLDMFNESDVYRIKTKFTSWEFPPNHFFGPYELLNFTLVGPYATTIGSKRSTLNSVILLAAILSAVASILATSAVIIFLLYRRHGKYQHKSSRKHKSPNVHIKIDSVKEFSFIELAIATNNFSSSTIVGKGGYGDVHKGILSGETLVAIKRAAEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEEEEQMLVYEFMPNGTLRDWISGKSEKAKERQNFGMGLKIALGAAKGILYLHTEANPPIFHRDIKASNILLDSKFTAKVADFGLSLLAPEGSGAKLSTVVKGTPGYLDPEYVSTQKFTDKSDIYSLGIVFLELLTGMQPISRGKHIVNEVNAACRSGLIYSVIENRMGLYPSHCLDKFLSLALRCCQDKPEERPSMVDVVRELEDIAAMPSRSHEASFPDVSIDNSGEMAREDQHKYAHVSGSNLVSGVIPTVVPR* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01168 941 ProSiteProfiles Protein kinase domain profile. 621 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01168 941 SUPERFAMILY L domain-like 236 379 - -
Phac8g01168 941 Gene3D Ribonuclease Inhibitor 222 413 IPR032675 -
Phac8g01168 941 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 28 189 - -
Phac8g01168 941 Gene3D Ribonuclease Inhibitor 29 146 IPR032675 -
Phac8g01168 941 SUPERFAMILY L domain-like 25 286 - -
Phac8g01168 941 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 215 307 - -
Phac8g01168 941 Pfam Protein kinase domain 623 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01168 941 CDD STKc_IRAK 627 891 - -
Phac8g01168 941 FunFam Leucine-rich repeat protein kinase family protein 585 696 - -
Phac8g01168 941 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Phac8g01168 941 SUPERFAMILY Protein kinase-like (PK-like) 606 904 IPR011009 -
Phac8g01168 941 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 697 903 - -
Phac8g01168 941 PANTHER RECEPTOR-LIKE PROTEIN 55 37 892 - -
Phac8g01168 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Phac8g01168 941 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Phac8g01168 941 SMART serkin_6 621 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01168 941 Gene3D Ribonuclease Inhibitor 147 221 IPR032675 -
Phac8g01168 941 Gene3D Phosphorylase Kinase; domain 1 590 696 - -
Phac8g01168 941 Gene3D Transferase(Phosphotransferase) domain 1 697 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01168 Phac-Chr8 8298582 8308322 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01168 5 897 Receptor kinase-like Gene Family AT5G01950 57.017 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Phac8g01168 Pkinase 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01168 - - gmx:100798809 1446.03