Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00770 ATGATGGATCTTACACAAAGATTGACGCTTTTCCTTGTGGCGTTGTTTGTTTTGCAACTTTGTTGTGTCGCCAATGCCAATTTGGCTTTCCCTGTTGAACGCAAATTCAAAGGCCCCGTTCAAAACCTCGCTGCTATCAAAGATCATGATGCTCGTCGTCGAGGAAGGTTTCTCTCTGCCGTTGATGTCCCTCTTGGTGGCAATGGTCGTGCCAATTCAAATGGGCTGTATTATACCAAAATTGGGATTGGCTCTCCTGTGAAGGACTACTATGTACAAGTTGATACAGGGAGTGACATTCTGTGGGTGAATTGTGTTGGCTGCACAACATGTCCCAAGAAAAGCGGTCTTGGTATGGACTTAACCCTCTACGACCCTGAGGCATCCAAAACTTCAACTATGATTGGTTGTGACAATGACTTTTGCACTTCCACATATGATGGTCCTATTTCTGGATGCACAAAAGACATGTCCTGCCCATACAGCATAACTTATGGAGATGGAAGTACGACCTCTGGATCCTATGTTAAGGATTATCTTACATTCGACCGAGCCAGTGGTGATCTCAAAACTGTACCGGAAAATAGCACTGTGATTTTTGGGTGTGGAGCTAGACAATCTGGGACATTAAGTTCAGGTTCTGATGAATCCCTTGATGGAATAATTGGTTTAGGACAAGCAAATTCGTCTGTGCTTTCACAGCTTGCTGCAGCTGGAAAGGTGAAAAGGGTATTTTCACACTGCCTTGACAGTTTTAGTGGAGGAGGAATATTTGCCATAGGGGAAGTAGTGGAGCCAAAATTTAACAAAACTTCATTGGTACCAAAAATGGCACACTACAATGTGATTTTGAAGGACTTGGAGGTTGGTGGGGAGACTGTACAACTACCCACAGATATATTTGATTTTTCAAGTGGGAGGGGAACAATTATAGATAGTGGTACAACCCTGGCTTATCTTCCACCCACAGTTTATGAACAACTATTGGAGAAGGTTTTGGCACCACAGTCTGGAATGAAATTATATCTTGTTGAAGATCAATTTACATGTTTCCGTTTTGATGATAATATTGACAAGGGATTTCCAACTGTCAAGTTTACCTTCGAGGAGGGGCTTACTCTGACAGCTTATCCTCATGATTACCTATTCCTCTTTAAAGAAAACATGTGGTGTGTTGGCTGGCAAAAAAGTATGGCCCAAACTAAGGATGGACATGACATAATTCTTCTTGGAGATTTGGTGTTATCAAACAAATTAGTTGTATATGATCTTGAAAACATGACCATTGGATGGGCTGAATACAATTGCTCTTCCAGCATCAAAGTGAAGGATGATAAGACTGGAAATGTATATGCAGTGAGCGCACATGATCTTTCTTCAGCTTCCACCATGTTAATTGGAAGTGTATTAACGCTCTTAATGATGCTTATTACAATGCTAATCTCTTAA 1449 0.4141 MMDLTQRLTLFLVALFVLQLCCVANANLAFPVERKFKGPVQNLAAIKDHDARRRGRFLSAVDVPLGGNGRANSNGLYYTKIGIGSPVKDYYVQVDTGSDILWVNCVGCTTCPKKSGLGMDLTLYDPEASKTSTMIGCDNDFCTSTYDGPISGCTKDMSCPYSITYGDGSTTSGSYVKDYLTFDRASGDLKTVPENSTVIFGCGARQSGTLSSGSDESLDGIIGLGQANSSVLSQLAAAGKVKRVFSHCLDSFSGGGIFAIGEVVEPKFNKTSLVPKMAHYNVILKDLEVGGETVQLPTDIFDFSSGRGTIIDSGTTLAYLPPTVYEQLLEKVLAPQSGMKLYLVEDQFTCFRFDDNIDKGFPTVKFTFEEGLTLTAYPHDYLFLFKENMWCVGWQKSMAQTKDGHDIILLGDLVLSNKLVVYDLENMTIGWAEYNCSSSIKVKDDKTGNVYAVSAHDLSSASTMLIGSVLTLLMMLITMLIS* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00770 482 Gene3D Acid Proteases 263 442 IPR021109 -
Phac8g00770 482 PANTHER ASPARTYL PROTEASES 12 430 IPR001461 GO:0004190|GO:0006508
Phac8g00770 482 Pfam Xylanase inhibitor C-terminal 279 432 IPR032799 -
Phac8g00770 482 Pfam Xylanase inhibitor N-terminal 77 261 IPR032861 -
Phac8g00770 482 Gene3D Acid Proteases 59 262 IPR021109 -
Phac8g00770 482 CDD pepsin_A_like_plant 77 436 IPR034161 -
Phac8g00770 482 PRINTS Pepsin (A1) aspartic protease family signature 83 103 IPR001461 GO:0004190|GO:0006508
Phac8g00770 482 PRINTS Pepsin (A1) aspartic protease family signature 309 320 IPR001461 GO:0004190|GO:0006508
Phac8g00770 482 PRINTS Pepsin (A1) aspartic protease family signature 408 423 IPR001461 GO:0004190|GO:0006508
Phac8g00770 482 FunFam Eukaryotic aspartyl protease family protein 67 261 - -
Phac8g00770 482 SUPERFAMILY Acid proteases 71 440 IPR021109 -
Phac8g00770 482 FunFam Eukaryotic aspartyl protease family protein 262 443 - -
Phac8g00770 482 ProSiteProfiles Peptidase family A1 domain profile. 77 432 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00770 Phac-Chr8 5041468 5046823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00770 41 436 Miscellaneous Gene Families AT1G77480 26.859 2.28e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00770 - - gmx:100792305 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g00770 8 5041468 5046823 Phac8g00770 8 5041468 5046823 ECH