Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00539 ATGTCCAATCTGCATCATCTTCTTATTGTTTTTCTTCTGGCCCCTGCATTCATGTGTAGCATTGTGGATTCAATGCTGTTCGAGGTGAGATCCTCTCATCCCAAGTGCATTTCCGAGGATATGAAGGCCAACGTCATCTCCGCCGGCAATTACCACGTCGTTAATCACAACAATGTCGGCACCGTTCCTGATGATCACAAGATCTCTGTTAGGGTGCGTTCGCCTTATGGACACGGTTATCACTATGGGGATAATGTGCTTTTTGGTGATTTTGCATTTACTGCAGCTGAGTCTGGTGATTACACCGCTTGTTTTTCGGTGCAAGCGCATACCATGGATCCTGTTACCATTGATTTTGTTTGGAAAACTGGGGTTGCTGCCAAGGACTGGAATAATGTTGCCAAGAAAGGCCAGATTGATGAAATGGAATTGGAGTTAAGGAAGTTGAATGAGGCCGTCACATCTATCCACGACGAGATGTTTTATCTTCGTGAAAGGGAGATAGAGATGCAAGAACTTACCGACGAGACTAACACCAAGATGTTCACCTACAGTTTCATTTCAATTTTAGTTTGCTTGTCGGTGGCTGGTTTGCAACTATGGCATTTGAAGACATTCTTTGAGAGGAAGAAGCTCCTCTAA 642 0.4424 MSNLHHLLIVFLLAPAFMCSIVDSMLFEVRSSHPKCISEDMKANVISAGNYHVVNHNNVGTVPDDHKISVRVRSPYGHGYHYGDNVLFGDFAFTAAESGDYTACFSVQAHTMDPVTIDFVWKTGVAAKDWNNVAKKGQIDEMELELRKLNEAVTSIHDEMFYLREREIEMQELTDETNTKMFTYSFISILVCLSVAGLQLWHLKTFFERKKLL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00539 213 Pfam emp24/gp25L/p24 family/GOLD 26 208 IPR009038 -
Phac8g00539 213 SMART EMP24_GP25L_2 24 208 IPR009038 -
Phac8g00539 213 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 8 210 IPR015720 -
Phac8g00539 213 Coils Coil 132 159 - -
Phac8g00539 213 ProSiteProfiles GOLD domain profile. 34 148 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00539 Phac-Chr8 3427244 3430617 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00539 K20352 - gmx:100792995 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g00539 8 3427244 3430617 Phac8g00539 8 3427244 3430617 ECH