Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g02315 ATGCTTAATTTTCTAATCCCTCCCAATTCTCCTCAGTGTGACAGTTATTTCTCATGGAGGGACCCACTGATTTTCTTATTTTTATCAAATTGTACTGCCATACTCTCATTTCATATGCACTTTCTTCGAACAGTCCCTCTCCTTTTCACTCTCTCACCCTGCATTTATAATAGCAGCATCATTCTTCTTTCTGCTTACACTTTACCTTACTTACTCGCCTTTTCCTTCATGGCTCTGATACCTCTGTTTGCTATTTTATTCTTTATGGCCTCCCCAAGCAATGCTTACTGGCCACCTTCACCTAGTTACAGGCCAAGTTCCAAATTCAGGCCTGTGAACTTCTACAAAGGGTTCAGAAATCTTTGGGGTCCGCAGCACCAAAGCATTGACCAAAATGCATTAACAATATGGCTTGATAGGACTTCAGGAAGTGGCTTCAAGTCAGTTCGTCCATTTCGATCCGGGTACTTTGGTGCTTCCATTAAGCTCCATCCTGGCTATACTGCAGGAGTTATTACAGCTTTCTATCTTTCTAACAACGAGGCACATCCGGGCTTCCATGATGAAGTGGACATTGAGTTTCTTGGGACGACATTTGGAAAGCCTTACACTTTACAGACCAATGTTTATATAAGAGGAAGTGGGGATGGCACAATTATTGGCAGAGAAATGAAGTTCCACCTTTGGTTTGATCCTACACAAAACTTTCATCACTATGCTATACTTTGGAGTCCTAAGGAAATAATATTCCTTGTGGATGATATTCCCATAAGGAGGTACCCAAGAAAGAGTGCTGAAACATTTCCACTACGACCAATGTGGCTTTATGGTTCAATATGGGATGCCTCATCATGGGCAACAGAAGATGGAAAGTACAAAGCTGATTACAGATACCAACCTTTTGTTGCAAAGTACACTAACTTCAAGGTTGGTGGTTGCTCAGCCTATGCCTCTCGTTGGTGCCGTTTAGCCTCAGCCTCACCATATCGCTCTGGTGGCTTGACCAGACGCCAATACTGGACCATGAGATGGGTGCAAAAGTACCACATGGTCTATAACTATTGCCAAGATCCCAAAAGAGACCACAGACTAACACCTGAGTGTTGGGGGTAA 1113 0.4304 MLNFLIPPNSPQCDSYFSWRDPLIFLFLSNCTAILSFHMHFLRTVPLLFTLSPCIYNSSIILLSAYTLPYLLAFSFMALIPLFAILFFMASPSNAYWPPSPSYRPSSKFRPVNFYKGFRNLWGPQHQSIDQNALTIWLDRTSGSGFKSVRPFRSGYFGASIKLHPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGTIIGREMKFHLWFDPTQNFHHYAILWSPKEIIFLVDDIPIRRYPRKSAETFPLRPMWLYGSIWDASSWATEDGKYKADYRYQPFVAKYTNFKVGGCSAYASRWCRLASASPYRSGGLTRRQYWTMRWVQKYHMVYNYCQDPKRDHRLTPECWG* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g02315 370 Pfam Glycosyl hydrolases family 16 116 297 IPR000757 GO:0004553|GO:0005975
Phac7g02315 370 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 106 368 IPR044791 GO:0004553
Phac7g02315 370 FunFam Xyloglucan endotransglucosylase/hydrolase 101 369 - -
Phac7g02315 370 Gene3D - 94 368 - -
Phac7g02315 370 SUPERFAMILY Concanavalin A-like lectins/glucanases 136 356 IPR013320 -
Phac7g02315 370 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 93 305 IPR000757 GO:0004553|GO:0005975
Phac7g02315 370 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 327 368 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g02315 Phac-Chr7 26824997 26827820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g02315 77 368 Glycoside Hydrolase AT3G44990 63.823 4.70e-136 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g02315 K08235 - gmx:100813742 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g02315 7 26824997 26827820 Phac7g02315 7 26824997 26827820 ECH
Phac1g02611 1 35521687 35526127 Phac7g02315 7 26824997 26827820 PCT