Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01178 ATGGAAGATTTTAACGGTAACGGTGAACCGGTTCAGCTGATTGGATTTGGAAGTGAGGTGAGGGACTCCGTTCACAATCAGCACCGAAGATCGGAGACGAGGCACGTGCTAACTAACTACCAATCCGCAAGACAAACACAAATCGCTACAAAACCCAAGCGGCGCAATTTAGCACCGCCACCGCAAACCCTCCCTCAATCCAGCACCGTGACCATGGAGAAGATGCGTCACGCCGAGGAGCTGGTGAGGGAGTTTCTGGTGTTCCGCGGCTTCACCAACACTCTCGAATCATACGAGACTGAATTGCGCACCGACATCGGCAAGGGCTTCGAGGTCAACAAGATCCTCGACCTAATCTTCTCCGTCTACGTTCCTAAGTTCCACGCCGATAAGCTTGTCGCGCTTCTCGGGTTCTTCAAACACTACCTCTCTTCCTCCTCCGACACGCTACTCGTCTCCACGCTCTCGAAGTTGGAGGCTTCTATTCTACGCTTCTACGTCGTCCACGCCGTGCAGTGCAATCGCAACGACAAGGTGGTTGAGTTCTTCGCGCTCTACGGTTCCGAATTGTTGCAGAGGTCGCAAGATTGGACTCTCTGGTTCTCAATTCCTTATAAGAAGAACCCGCACTTGGATCCCGAGTTTCGGGTTTTTTTCTCTAAGGAGTGGTATCAGGCTTTGCATCTTTCTTCTAGGAACTTCTTCAGCGAGGTTAGTTCGGAGATGAATGCTACTAATATACTCAAAAGAGATATCGTACATTTAAATCTGAAGTTGTCCCAACTTCAGGCTTTGCTTGATGAGAAAGAGGCACAGTTACGCCAATTTAGAAGTATGGAAGGGAGTATTGGTTCATCAAGCAATTTGCGTGAAGAAAGTACCCGTACGGTGAAAAATTCTCCGGATGTTTTTCCAACTAGCATTTCACAAGTTGGTCAAATCGAGGTTAGCCAAGATTTAGCTGTGGGTGAACTCGGAAATGTTCATTCCGAGTTGATTGGCTCCTCATCTGGTGATGATGATTCAGCTTCTCTATCGAATGACTGTTTGAGGAACGGCGGAGCTGACAATGCCAGTCTAAAAGAAAACGATGGGGATGAAGATTTTGCTGAGGTCAAATTAGAGCACCAGGAGACATTTCTGGGGCACACCAGTCCAATCAGTCGATGTCGCTTCTCTGCATCTGGAAACAATATTGCCAGTGCTTCTCTGGATGGAACTGTCAGGATATGGACATATGATACATCAACTCCAGTGTCTAGAAACGCAACCATATATTGTGGCACTGAAATTTTGTCACTTGACTGGGAATGTAAATCAGACCGCTTGCTTCTTATAGGTACATCCGATGGGTGCATTAAAGCATGGAATGTGGATGCAAAGAGAGTTGTCTGTGATCTCAGCACAACTGAATCATTTCCAAGTGTATTGGACATAAAGTGCAGTCCTGTGGAACCTATTTTTGTGTCTGCAGCAGCATCTGGAGGGGCTGGTTCCAAATATGTTGGCAACCTGGGTTTTGCTTCCCTGACTGTGTGGAACATGAAGACTTGGAAAGCCATGACAGTCCTTCCTCTTGGAGAAGATCCCCCAGCAATTACTTCTCTATGCTTTAATCACAATGGAAAGATTTTGGCAGCTTCTGCAGTTGATGGAATGATTCACATTGACCTCATGGTTTGA 1683 0.4682 MEDFNGNGEPVQLIGFGSEVRDSVHNQHRRSETRHVLTNYQSARQTQIATKPKRRNLAPPPQTLPQSSTVTMEKMRHAEELVREFLVFRGFTNTLESYETELRTDIGKGFEVNKILDLIFSVYVPKFHADKLVALLGFFKHYLSSSSDTLLVSTLSKLEASILRFYVVHAVQCNRNDKVVEFFALYGSELLQRSQDWTLWFSIPYKKNPHLDPEFRVFFSKEWYQALHLSSRNFFSEVSSEMNATNILKRDIVHLNLKLSQLQALLDEKEAQLRQFRSMEGSIGSSSNLREESTRTVKNSPDVFPTSISQVGQIEVSQDLAVGELGNVHSELIGSSSGDDDSASLSNDCLRNGGADNASLKENDGDEDFAEVKLEHQETFLGHTSPISRCRFSASGNNIASASLDGTVRIWTYDTSTPVSRNATIYCGTEILSLDWECKSDRLLLIGTSDGCIKAWNVDAKRVVCDLSTTESFPSVLDIKCSPVEPIFVSAAASGGAGSKYVGNLGFASLTVWNMKTWKAMTVLPLGEDPPAITSLCFNHNGKILAASAVDGMIHIDLMV* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01178 560 Pfam WD domain, G-beta repeat 533 556 IPR001680 GO:0005515
Phac7g01178 560 Pfam WD domain, G-beta repeat 376 411 IPR001680 GO:0005515
Phac7g01178 560 SUPERFAMILY WD40 repeat-like 372 556 IPR036322 GO:0005515
Phac7g01178 560 SMART WD40_4 418 457 IPR001680 GO:0005515
Phac7g01178 560 SMART WD40_4 373 412 IPR001680 GO:0005515
Phac7g01178 560 SMART WD40_4 517 557 IPR001680 GO:0005515
Phac7g01178 560 ProSiteProfiles Trp-Asp (WD) repeats profile. 380 421 IPR001680 GO:0005515
Phac7g01178 560 MobiDBLite consensus disorder prediction 45 69 - -
Phac7g01178 560 Coils Coil 252 279 - -
Phac7g01178 560 Gene3D - 364 556 IPR015943 GO:0005515
Phac7g01178 560 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 380 415 - -
Phac7g01178 560 PANTHER OS05G0299300 PROTEIN 72 556 - -
Phac7g01178 560 MobiDBLite consensus disorder prediction 283 302 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01178 K24760 - gmx:100788591 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g01178 7 7558733 7570711 Phac7g01178 7 7558733 7570711 ECH