Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01107 ATGTGGCCATTCAAAAGGAAAGGGGCTTCTGGGTTTTCATCATCATCCACTGCAGAGCAAGTCACTGAAGGTCTTGATGGAACTGGTCTCACTGCCATTGTTACAGGAGCATCCAGTGGTATTGGCACTGAGACTACACGTGTACTTGCTTTGCGAGGTGTCCATGTGATTATGGGTGTGAGAAATATGATTGCTGCTAAAGATGTCAAAGAAACAATACTTAAGGAGATTCCCTCTGCAAAAGTTGATACCTTGGAGTTAGATCTCAGTTCAATGGATTCTGTCAATAAATTTGCATCAGATTTTAAGTCTTCTGGTCTTCCATTGAACATCTTGATAAACAACGCAGGAATTATGGCATGTCCTTTCAAGCTCTCTGCAGACAAAATTGAACTACAGTTTGCCACAAATCACATAGGTCATTTTCTATTGACAAATCTTTTGTTGGACACCATGAAGAAAACTTCACGTGAAACTAAGAAAGAAGGAAGAATTGTTAATGTCTCTTCTGAAGCTCACCGATTTGCATATTCTGAAGGAATCCGTTTTGACAAAATTAATGATCAGTCAAGTTACAACAACTGGCGTGCATATGGGCAGTCAAAGCTGGCCAACATTTTACATGCAAATGAACTTGCAAGACGTCTCAAGGAAGATGGGGTGGAGATTTCTGCAAATTCTCTTCATCCTGGAACAATTACCACCAATCTTTTCCGTCATATTCCAGTGAACGGTATAGTTAGTGCTATTGGTAGACTCGTGTTTAAAAATGTCCAGCAGGGAGCAGCAACAACATGCTATGTAGCATTGCACCCACAAGTGAAGGGAATTAGTGGCAATTATTTTTCGGACAGTAATGTGGCCAAACCAACCTCACAGGGTACTGATGCTGATTTGGCCAAGAAACTTTGGGATTTTAGCTTGAATTTGACCAAGTAA 939 0.4068 MWPFKRKGASGFSSSSTAEQVTEGLDGTGLTAIVTGASSGIGTETTRVLALRGVHVIMGVRNMIAAKDVKETILKEIPSAKVDTLELDLSSMDSVNKFASDFKSSGLPLNILINNAGIMACPFKLSADKIELQFATNHIGHFLLTNLLLDTMKKTSRETKKEGRIVNVSSEAHRFAYSEGIRFDKINDQSSYNNWRAYGQSKLANILHANELARRLKEDGVEISANSLHPGTITTNLFRHIPVNGIVSAIGRLVFKNVQQGAATTCYVALHPQVKGISGNYFSDSNVAKPTSQGTDADLAKKLWDFSLNLTK* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01107 312 CDD retinol-DH_like_SDR_c_like 29 304 - -
Phac7g01107 312 Gene3D - 22 312 - -
Phac7g01107 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 107 118 IPR002347 -
Phac7g01107 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 171 IPR002347 -
Phac7g01107 312 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 217 IPR002347 -
Phac7g01107 312 PANTHER RETINOL DEHYDROGENASE 10 311 - -
Phac7g01107 312 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Phac7g01107 312 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Phac7g01107 312 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Phac7g01107 312 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Phac7g01107 312 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Phac7g01107 312 Pfam short chain dehydrogenase 31 177 IPR002347 -
Phac7g01107 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 288 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01107 Phac-Chr7 6939445 6945183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g01107 31 290 Acyl Lipid Metabolism Gene Families AT1G62610 27.758 6.32e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01107 - - gmx:100796920 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g01107 7 6939445 6945183 Phac7g01107 7 6939445 6945183 ECH