Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g01036 ATGGGAAAGCAAAAGCAACAAGTGATTTCCCGCTTCTTCGCTCCCAAAGACAAATCTCCTTCTCCTTCTTCTCCCCGTCCCAACCCTCCCACTCCCAAAATCTCTGCCACCGCCACATTCTCCCCTTCCAAACGCCGCTTAACATCCCAACTCACACCCCCTCGCAAGCTCCAGAAGCTTCTCGAACCTTCTTCCTCTTCACTCCACCAACGCTTCCTCCACAAGTTTCTCGAACCTTCCTCCCCTCAACACCCTCCTCTCCCTTCCTCTTCCAAACGCCTAACCTACACTCCCCTCGAACAGCAGGTTCTCCAACTCAGAGCCAAACACCCCGACGTTCTCCTCATGGTCGAGGTTGGTTACAGGTACCGTTTCTTCGCCCAAGACGCCGAACACGCCGCCAGAGTGTTAGGCATTTACGCGCACATGGATCACAATTTCTTAACCGCTAGCATACCGACGTTTCGACTGAATGTCCACGTCAGGAGGCTCGTCAGTGCTGGGTATAAGGTCGGCGTTGTCCGGCAGACCGAGACCGCCGCCATCAAGGCTCACGGCTCCAACCGCTCGGCGCCGTTTGGGCGCGGGCTGTCGGCGCTTTACACGAAGGCCACGCTCGAGGCGGCCCCGGAGATTGGGGGAGGGGGGGACGGGTGTGGTGGAGAGAGTAATTACTTGCTGTGTGTGGTGGAGAAGAGTGTTGTGGGGGAGAAGGGGAATTGTGGTGTGGAGGGTGGTGGTGATGTGAGGGTTGGGATTGTTGCTGTGGAGATTTCGACCGGGGATGTTGTTTATGGGGAGTTTTGTGATAGTTTTCTGCGGAGTGCGCTTGAGGCTGTTCTTGTGAACTTGTCTCCGGCTGAGTTGCTTCTTGGGGACCCTCTTTCAAAGCAAACGGAGAAGTTATTGCTGGATTTTGCTGGACCTGCCTCAAATGTTCGTGTGGAGCATCTTTCACGAGATTGCTTCACTGATGGGGGTGCTCTTTCTGAAGTTATGACCTTGTATGAGAACGTGGATGTAGACAGTCTATCAGATTCAATACAAAGCAAGAATTCGACTGAGCACAGAAGTCAGCAGTTAGTAATCAAGGAGGTTATGAACATGCCAGATTTGTCTGTCCAAGCTTTGGCCTTGACTATTCGTCATTTAAAGGAATATGGTTTTGAAAGAATTTTGTGTTCAGGAGCTTCTTTAAGGCCCTTCTCAAACAATATAGAAATGACCCTTTCAGCCAATACACTTCAACAACTGGAGGTTTTGAAAAATAATAATGATGGATCTGAGATTGGTTCCTTGCTGCAAATTATGAATCATACTCTCACTATATTTGGTTCCAGACTTCTTAGGCATTGGGTATCTCACCCATTGTGTGATCGAACCTTAATTTCTGCTCGCCTTCATGCTGTATCTGAAATTGCGGAGTCCATGGGATCTTGTAATGGTACGAACAATTTTGGACATGTTGAAGATCCTGATGTAGCAATCGTGCAACCTGAGTTAGCATACGTTCTTTCATTGGTTTTGACAAATCTTGGCCGAGCACCTGATATACAACGTGGAATTACAAGAATTTTCCATTGCACTGCTTCCCCATCTGAGTTTGTTGCAGTAATTCAAGCTATTTTATCTGCTGGAAAACAGCTACAACAACTTAACATAGGAGAGGGGAATAATAACAAATTGCGCTCCAATCTATTAAAAAGGTTAGTTTTGACTGCTTCCTCTGACAGTACTATTGACAATGCTGCAAAAATGTTGTCATCTTTAAACATAGACTCTGCTGATCAAGGAGATCTAACAAAATTGATCACTGCTTCGGAGGGACAATTCCCAGAGGTCAGTAGAGCTCGTAAGGATTTCAAGCTGGCAGTGGAACAATTAGATTCGCTGATTGACTTGTATCGCAAATTGCTTAAAATGCAAAATTTGGAATTTATAAGTATTTCTGGAACAACTCATTTGATTGAGTTATCAACAGATGTAAAGGTTCCTTCAAACTGGATCAAGGTAAATAGCACGAAGAAAACAATTCGGTATCACCCTCCTGAAGTAGTGACAGCATTGGACAGGTTGTCATTAGCAAAAGAGGAGCTCAGTGTTGCGTGCCGAGCTGCCTGGAATAGCTTTCTTAGGGGCTTCAGTAAACACTATGCTGAGTTCCAAGCTGTTGTTCAAGCACTAGCTGCTTTAGATTGTTTGCATTCACTTGCCATTCTTTCAAGAAATAAGGGTTATGTTTGCCCAGTGTTACTAGATGATCAAGAGCCTGTTCAGATACAAATTTGTTCTGGTAGACATCCGGTTTTGGAGACCACCTTACACGACAATTTTGTCCCAAATGATACAAACTTGCATGCGGATGGAGAATACTGTCAGATTGTTACTGGACCCAATATGGGTGGAAAAAGTTGCTATGTTCGCCAGGTGGCTCTGATTGCTATAATGGCTCAGCATCATCAGCAAGACTGCACGTCCTGGACAGGATCTGCACCCGAATGGGTGCTTCTGACAGTATTCAAGAAGGGAGAAGCACCTTCCTAG 2544 0.4634 MGKQKQQVISRFFAPKDKSPSPSSPRPNPPTPKISATATFSPSKRRLTSQLTPPRKLQKLLEPSSSSLHQRFLHKFLEPSSPQHPPLPSSSKRLTYTPLEQQVLQLRAKHPDVLLMVEVGYRYRFFAQDAEHAARVLGIYAHMDHNFLTASIPTFRLNVHVRRLVSAGYKVGVVRQTETAAIKAHGSNRSAPFGRGLSALYTKATLEAAPEIGGGGDGCGGESNYLLCVVEKSVVGEKGNCGVEGGGDVRVGIVAVEISTGDVVYGEFCDSFLRSALEAVLVNLSPAELLLGDPLSKQTEKLLLDFAGPASNVRVEHLSRDCFTDGGALSEVMTLYENVDVDSLSDSIQSKNSTEHRSQQLVIKEVMNMPDLSVQALALTIRHLKEYGFERILCSGASLRPFSNNIEMTLSANTLQQLEVLKNNNDGSEIGSLLQIMNHTLTIFGSRLLRHWVSHPLCDRTLISARLHAVSEIAESMGSCNGTNNFGHVEDPDVAIVQPELAYVLSLVLTNLGRAPDIQRGITRIFHCTASPSEFVAVIQAILSAGKQLQQLNIGEGNNNKLRSNLLKRLVLTASSDSTIDNAAKMLSSLNIDSADQGDLTKLITASEGQFPEVSRARKDFKLAVEQLDSLIDLYRKLLKMQNLEFISISGTTHLIELSTDVKVPSNWIKVNSTKKTIRYHPPEVVTALDRLSLAKEELSVACRAAWNSFLRGFSKHYAEFQAVVQALAALDCLHSLAILSRNKGYVCPVLLDDQEPVQIQICSGRHPVLETTLHDNFVPNDTNLHADGEYCQIVTGPNMGGKSCYVRQVALIAIMAQHHQQDCTSWTGSAPEWVLLTVFKKGEAPS* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g01036 847 Pfam MutS domain V 793 818 IPR000432 GO:0005524|GO:0006298|GO:0030983
Phac7g01036 847 FunFam DNA mismatch repair protein Msh3 588 714 - -
Phac7g01036 847 SUPERFAMILY DNA repair protein MutS, domain II 222 342 IPR036678 GO:0005524|GO:0006298|GO:0030983
Phac7g01036 847 Gene3D - 746 820 IPR027417 -
Phac7g01036 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 746 819 IPR027417 -
Phac7g01036 847 Gene3D DNA repair protein MutS, domain I 88 211 IPR016151 GO:0005524|GO:0006298|GO:0030983
Phac7g01036 847 Gene3D MutS, connector domain 220 407 IPR036678 GO:0005524|GO:0006298|GO:0030983
Phac7g01036 847 FunFam DNA mismatch repair protein 87 215 - -
Phac7g01036 847 Pfam MutS domain III 413 738 IPR007696 GO:0005524|GO:0006298|GO:0030983
Phac7g01036 847 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 101 818 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Phac7g01036 847 SUPERFAMILY DNA repair protein MutS, domain III 412 743 IPR036187 -
Phac7g01036 847 MobiDBLite consensus disorder prediction 1 53 - -
Phac7g01036 847 SUPERFAMILY DNA repair protein MutS, domain I 91 205 IPR016151 GO:0005524|GO:0006298|GO:0030983
Phac7g01036 847 Pfam MutS domain I 97 207 IPR007695 GO:0005524|GO:0006298|GO:0030983
Phac7g01036 847 Gene3D - 410 738 - -
Phac7g01036 847 PIRSF Msh6 87 819 IPR017261 GO:0006298|GO:0030983
Phac7g01036 847 MobiDBLite consensus disorder prediction 33 53 - -
Phac7g01036 847 Pfam MutS domain II 224 326 IPR007860 GO:0005524|GO:0006298|GO:0030983
Phac7g01036 847 Gene3D - 588 714 - -
Phac7g01036 847 SMART DNAend 428 773 IPR007696 GO:0005524|GO:0006298|GO:0030983
Phac7g01036 847 FunFam DNA mismatch repair protein 220 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g01036 Phac-Chr7 6558094 6566922 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g01036 K08736 - gmx:100789883 1306.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g01036 7 6558094 6566922 Phac7g01036 7 6558094 6566922 ECH