Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00999 ATGAAGATACCCGGCCCGTTGTTTGGCAGGGTTAAGAGCCGTTCTTGGCTTTGGACACGCAGACTTCACTCTTCATCAATGGCATCCTCTGCCAGCAACAAAGAGCAAGTGCAACCCACACCCGAGGACCCTGAGAAGAAAAAGAAAAAGGAAGAAAAGGCTAGAGAGAAGCAATTGAAGAAAGAGAAGTTTCTTCTTAAGCAAGCTCAGCAGCAAGCACAACAATCATCCAATGCTTCTAAAAAAAGTGAAAAGAAAGTTGTAAAGCGTGGCGCGGAGGATGAGAATCCTGAAGATTATGTTGATCCTGAGACTCCAATTGGTGAGAAGAAGCAAATGGCTCGGCAAATGGCAAAGCAGTATAGTCCAACTGCCGTGGAGAAATCGTGGTATGAATGGTGGGAGAAATCAAGGTACTTTGTGGCAGATGCTAACAGCTCCAAACCTCCTTTTGTTATTGTTTTGCCCCCTCCGAATGTGACTGGTGCTCTCCATATAGGTCATGCTCTAACAGCCGCAATAGAGGACACAATGATTCGATGGAAGAGGATGTCTGGATACAATGCCTTGTGGGTACCTGGGATGGATCATGCTGGGATTGCTACGCAGGTAGTTGTGGAGAAGAAGATAATGCGGGAAAGAAAACTAACCAGGCATGATTTGGGTCGTGAGAAATTTGTCTCTGAGGTTTGGGATTGGAAACACAAGTATGGGGGCACAATATTACAACAATTGCGCCGATTAGGAGCCTCTTTGGATTGGTCTCGTGAGTGCTTCACAATGGATGAAAGAAGAAGTAAGGCTGTGACAGAGGCTTTTGTAAGGCTTTACAAGCAAGACCTTATCTATAGGGACCTTCGTTTAGTGAATTGGGATTGTGTGTTACGAACTGCAATATCTGATATTGAGGTGGATTATATTGATATAAAAGAAAGGAGTCTACTAAAGGTTCCAGGATATGATAAACCAGTGGAATTTGGAGTTTTAACAAAGTTTGCATACCCTGTGGAAGGGAACCTAGGTGAAATTGTTGTTGCCACAACTAGAATTGAAACAATGCTTGGTGACACTGCTATTGCAGTACATCCTAATGATGACAGATATAGCCATTTTCATGGAAAATATGCTATTCATCCATTTAATGGAAGAAAACTTCCTATAATCTGTGATGATATTCTTGTTGATCCAAAGTTCGGGACTGGTGCTGTTAAGATTACACCTGCTCATGATCCAAATGATTTTGAGGTGGGTAAACGTCACAACCTTGAATTCATTAATGTTTTCACAGATGATGGGAAAATAAATTCCAGTGGTGGCTCTGATTTTGTGGGCATGCCACGGTTTAAAGCTCGAGAGGCAGTAACAGAATTTTTACAGAAGAAGGGTCTTTATAGAGGATCTGAAAACAATGAAATGCGCCTTGGGGTTTGTTCAAGAAGCAATGATGTTGTGGAGCCCATGATAAAGCCCCAGTGGTATGTCAGTTGCAATGATTTGGCTAAGCAAGCTCTTAATGCTGCTGTTGACGAGGAAAACAAAAGGCTAGATATTGTTCCAAAACAATATTTGGCTGATTGGAAGAGATGGCTAGAAAACATTCGTGATTGGTGCATTTCACGACAGCTATGGTGGGGTCACAGAATACCTGCATGGTATGTCACTTTGGAGGATGACGTGCTGCAGGAATTTGGTGCTTATAACGATCATTGGGTTGTGGCAAGAAATGAAGAGGAGGCCCAAAAGGTTGCTAGCCAGAAGTACGGTGAAAAGAAGTTTCGTTTAGGCCAGGATCCTGATGTTCTTGATACATGGTTTTCTTCTGGTCTGTTCCCATTATCTGTGCTGGGATGGCCTGATGAGACAGAGGACCTGAAGACATTCTATCCAACTTCTGTTCTGGAAACTGGCCATGATATCATCTTTTTTTGGGTTGCTCGTATGGTGATGTTTGGATTGAAGTTGGGTGGTGATGTGCCTTTCTCAACGATTTATTTGCATCCCATGATTCGTGATGCACATGGGCGGAAGATGTCCAAGTCCCTGGGGAATGTTATTGATCCTATTGAAGTGATAAGTGGGATATCTCTGGAAGGTCTACACAAGAGGTTAGAGGCTGGCAACCTGGATCCCAAAGAACTTGCTACTGCTATAGAGGGTCAGAAGAAGGACTTTCCAAATGGTATTGATGAATGTGGAGCCGATGCTCTCCGTTTTGCACTGGTCTCATACACAGCTCAGTCTGACAAAATTAACCTAGATATTCAAAGGGTGGTTGGGTATCGCCAATGGTGTAATAAACTGTGGAATGCAGTAAGGTTTGCTATGAGCAAGCTTGGGGATGATTATATTCCACCAGCAGAATTGAATCTAGATGTTCTCCCATTTAGCTGCCTGTGGATACTCTCAGTGTTGAATAAAACCATAACGAAAACAGTGAAGTCTCTAGAATCATTTGAATTCTCGCAAGCTACCACTGCTGTATATTCTTGGTGGCAGTATCAATTGTGTGATGTATTTATTGAAGTGATTAAGCCTTACTTTACTGGTAATGATCCTAAGTTTGCTTCTGAAAGACGCCTTGCACAAGATACTTTGTGGTTTTGTCTGGACAATGGCCTTCGATTGCTTCATCCCTTCATGCCTTTTGTCACGGAAGAATTATGGCAACGGCTTCCTTCACCCAGGGAATGTAAGAGAGCAGAATCTATCATGATATGCGATTATCCATCAGCTGTAGAGGGCTGGAATAATGAAACGGTGGAGAATGAAATGGACATTATTGAGTCTACTATTAAGTCTCTGAGGTCACTGGCTAAAGAAAAACGTGACAGGCGACCGGCTTTTGTTCTCTGCCGAACACAGGCGGTTACTGTGATTATTAAGAGCCACCAACTGGAGATTGTAACATTAGCTAATATATCGTCTTTGACAGTAATCTCTGAAACTGATGCTGTTCCATCTGGATATGCTGATGCCGTCGTAAATGAAAGCATTTCTGTTTATCTAGAATTACAAGGAACTAATTCTGCAGAGGCTGAGCAAGGGAAGATCAAGAAGATAGATGAGCTGAGAAAGCAAATAGAAAGACTAGAGAAGATTATGAATGCTCCAGGTTATGAAGAGAAGGTTTTACCAAATGTTCGAGCAAAGAACCAGGAGAAGCTAGATTCCCTAAAGGAGCGTTTATTGCTTGAGGAAACGGCTGGTCTGAATCTCTAG 3219 0.4259 MKIPGPLFGRVKSRSWLWTRRLHSSSMASSASNKEQVQPTPEDPEKKKKKEEKAREKQLKKEKFLLKQAQQQAQQSSNASKKSEKKVVKRGAEDENPEDYVDPETPIGEKKQMARQMAKQYSPTAVEKSWYEWWEKSRYFVADANSSKPPFVIVLPPPNVTGALHIGHALTAAIEDTMIRWKRMSGYNALWVPGMDHAGIATQVVVEKKIMRERKLTRHDLGREKFVSEVWDWKHKYGGTILQQLRRLGASLDWSRECFTMDERRSKAVTEAFVRLYKQDLIYRDLRLVNWDCVLRTAISDIEVDYIDIKERSLLKVPGYDKPVEFGVLTKFAYPVEGNLGEIVVATTRIETMLGDTAIAVHPNDDRYSHFHGKYAIHPFNGRKLPIICDDILVDPKFGTGAVKITPAHDPNDFEVGKRHNLEFINVFTDDGKINSSGGSDFVGMPRFKAREAVTEFLQKKGLYRGSENNEMRLGVCSRSNDVVEPMIKPQWYVSCNDLAKQALNAAVDEENKRLDIVPKQYLADWKRWLENIRDWCISRQLWWGHRIPAWYVTLEDDVLQEFGAYNDHWVVARNEEEAQKVASQKYGEKKFRLGQDPDVLDTWFSSGLFPLSVLGWPDETEDLKTFYPTSVLETGHDIIFFWVARMVMFGLKLGGDVPFSTIYLHPMIRDAHGRKMSKSLGNVIDPIEVISGISLEGLHKRLEAGNLDPKELATAIEGQKKDFPNGIDECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFAMSKLGDDYIPPAELNLDVLPFSCLWILSVLNKTITKTVKSLESFEFSQATTAVYSWWQYQLCDVFIEVIKPYFTGNDPKFASERRLAQDTLWFCLDNGLRLLHPFMPFVTEELWQRLPSPRECKRAESIMICDYPSAVEGWNNETVENEMDIIESTIKSLRSLAKEKRDRRPAFVLCRTQAVTVIIKSHQLEIVTLANISSLTVISETDAVPSGYADAVVNESISVYLELQGTNSAEAEQGKIKKIDELRKQIERLEKIMNAPGYEEKVLPNVRAKNQEKLDSLKERLLLEETAGLNL* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00999 1072 PRINTS Valyl-tRNA synthetase signature 479 492 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Phac7g00999 1072 PRINTS Valyl-tRNA synthetase signature 151 162 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Phac7g00999 1072 PRINTS Valyl-tRNA synthetase signature 597 618 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Phac7g00999 1072 PRINTS Valyl-tRNA synthetase signature 362 379 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Phac7g00999 1072 PRINTS Valyl-tRNA synthetase signature 628 646 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Phac7g00999 1072 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 158 169 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Phac7g00999 1072 FunFam Valine--tRNA ligase, mitochondrial 444 677 - -
Phac7g00999 1072 FunFam Valine--tRNA ligase, mitochondrial 707 942 - -
Phac7g00999 1072 PANTHER VALYL-TRNA SYNTHETASES 94 1066 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Phac7g00999 1072 Pfam Anticodon-binding domain of tRNA ligase 799 941 IPR013155 GO:0004812|GO:0006418
Phac7g00999 1072 CDD Anticodon_Ia_Val 752 891 IPR033705 -
Phac7g00999 1072 Gene3D - 758 942 - -
Phac7g00999 1072 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 764 1019 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Phac7g00999 1072 SUPERFAMILY Nucleotidylyl transferase 116 762 - -
Phac7g00999 1072 Coils Coil 66 86 - -
Phac7g00999 1072 Gene3D - 325 470 IPR009008 GO:0002161|GO:0006418
Phac7g00999 1072 FunFam Valine--tRNA ligase, mitochondrial 328 368 - -
Phac7g00999 1072 Gene3D HUPs 501 751 IPR014729 -
Phac7g00999 1072 Hamap Valine--tRNA ligase [valS]. 117 1071 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Phac7g00999 1072 MobiDBLite consensus disorder prediction 23 38 - -
Phac7g00999 1072 CDD ValRS_core 149 752 - -
Phac7g00999 1072 MobiDBLite consensus disorder prediction 65 81 - -
Phac7g00999 1072 FunFam Valine--tRNA ligase 369 437 - -
Phac7g00999 1072 MobiDBLite consensus disorder prediction 39 64 - -
Phac7g00999 1072 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 324 474 IPR009008 GO:0002161|GO:0006418
Phac7g00999 1072 NCBIfam valine--tRNA ligase 117 1055 IPR002303 GO:0000166|GO:0004832|GO:0005524|GO:0006438
Phac7g00999 1072 MobiDBLite consensus disorder prediction 82 96 - -
Phac7g00999 1072 FunFam Valine--tRNA ligase, mitochondrial 119 317 - -
Phac7g00999 1072 MobiDBLite consensus disorder prediction 23 106 - -
Phac7g00999 1072 Coils Coil 1013 1033 - -
Phac7g00999 1072 Gene3D HUPs 118 316 IPR014729 -
Phac7g00999 1072 Pfam tRNA synthetases class I (I, L, M and V) 130 753 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Phac7g00999 1072 Coils Coil 917 937 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00999 Phac-Chr7 6159758 6174943 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00999 K01873 - gmx:100798111 1885.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00999 7 6159758 6174943 Phac7g00999 7 6159758 6174943 ECH