Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00717 ATGTTGCAAACCCTAGGAGGCGTAACCCCTCGCTTCGTGAATCGGTCATGGCTCCGAAACCTGACGGTGCGTGCAATGACATTCTCTTCCTCCTCCGATTATGGAGACCAGTCACGAGGTGGCCTTCCCCGCTTCTACTCCGAAATTCTCCCTCCTTCCAAGGGTAGCGTTATACGCGTGCAAGGTGATGAATTCTGGCATATGACAAAAGTATTGAGGTTGAGCACCAACGATAGGGTACAGCTCTTCAATGGGAAAGGAGGTCTGGTAGAAGGATGCATACAGGACATTGATCGCAGTGGACTTGATTTTGTTGCATCGAGTGATTTGATATCAATACCTCCACAAAATACACAATTGCACGTATTTGCTGGTTTTGGTACTCTAAAGGGTGGCCGTGCTGACTGGCTTGTAGAGAAGTGCACAGAACTTGGAGCCGATAGTGTAACTCCTCTATTGACTGAACGTTCTCCATCCATCTCAGAAAATCGGGTGGACAGATTGAAACGTGTCATTTTAGCAGCATCGAAACAATGTCAACGATTGCATGAAATGGTTCTGAAAGATCCTTTAGAGATTGATGACCTTTTGCACCTTATAGCACAATCAAAGCTAGCTCTTGTTGCGACAGCGAAGGCAACTCCTGTTCTTAGTGCATTGACATCATTGGAAAAGGAAACCAGTGGCTTAATAATTATTGGACCAGAAGGCGATTTCACCGAGAATGAAGCGAGTATGATGATGGAAGCAGGTGGTACAGCTGTTAGTCTTGGACCTCATCGTCTTCGGGTTGAAACTGCCACGATATCACTTTTGGCAACTGTCATGTTATGGTCTGACTCGCTGGAAACTTCGGTCAGTTGA 864 0.4618 MLQTLGGVTPRFVNRSWLRNLTVRAMTFSSSSDYGDQSRGGLPRFYSEILPPSKGSVIRVQGDEFWHMTKVLRLSTNDRVQLFNGKGGLVEGCIQDIDRSGLDFVASSDLISIPPQNTQLHVFAGFGTLKGGRADWLVEKCTELGADSVTPLLTERSPSISENRVDRLKRVILAASKQCQRLHEMVLKDPLEIDDLLHLIAQSKLALVATAKATPVLSALTSLEKETSGLIIIGPEGDFTENEASMMMEAGGTAVSLGPHRLRVETATISLLATVMLWSDSLETSVS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00717 287 NCBIfam RsmE family RNA methyltransferase 57 276 IPR006700 GO:0006364|GO:0008168
Phac7g00717 287 Gene3D - 41 285 IPR029026 -
Phac7g00717 287 Pfam RNA methyltransferase PUA domain 61 104 IPR046887 -
Phac7g00717 287 SUPERFAMILY PUA domain-like 43 102 IPR015947 -
Phac7g00717 287 CDD RsmE-like 120 273 IPR046886 -
Phac7g00717 287 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E 41 283 IPR006700 GO:0006364|GO:0008168
Phac7g00717 287 FunFam uncharacterized protein LOC106771328 isoform X2 41 286 - -
Phac7g00717 287 Pfam RNA methyltransferase domain 118 275 IPR046886 -
Phac7g00717 287 SUPERFAMILY alpha/beta knot 118 279 IPR029028 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00717 K09761 - gmx:100777253 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00717 7 3989258 3992727 Phac7g00717 7 3989258 3992727 ECH