Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g00592 ATGCAAACCTTCACTTTCCTCTACCTCACCATCATTTCCCTCTCTCTCATCCTCTTCCACAACACCATCCTAGTCCAAGCCCTCACCTCACCCTTAGACATTGCAGCACTCAAAGCCTTCAAGGACTCAATCAAACCCTCCTCCATCGCACCCTCCTCTTGCCTCGCCTCATGGAACTTCACCACCGACCCATGCTCACTCCCTCGCCGCACCACCTTCATCTGCGGCCTCACCTGCACCACTGATTCCAGAAGAATCACCCAAATCACTCTCGACCCAGCAGGCTACTCCGGCACACTCACCCCACTAATCTCTCGATTCTCACAACTCACCACACTTGACCTCTCCGATAACAGCTTCTTCGGCTCAATCCCCTCTTCAATCTCCTCTCTCTACAACCTCCAAACCTTAACCCTCCGATCCAATTTCTTCTCCGGCCCAATCCCTCCCTCCATAACCACCCTCAAATCACTCCAATCTCTTGACCTTTCACACAATTCTCTTTATGGGTATCTGCTAAACTCCATGAACTCCCTCACCAAACTCCGTAGACTCGATCTCAGCTTCAACAAACTAACCGGTTCAATCCCCAAACTCCCACCCAACTTGCTCGAACTCGCGATCAAGGCCAATTATCTATATGGGCCTCTCCAAAAACAGAGCTTTCAAGGGATGAACCAGTTAGAAGTGGTGGAGCTAAGCGATAACAAGCTCTCCGGAACGGTAGAATCGTGGCTCTTCTCTTTACCGTCGCTGCAGCAAGTAAACTTGTCCAACAACACCTTCACGGCGGCGCAGATCTCGGGGCCACGCGCGGCCGATGGGGGAATCGGCAGCCGCAGCAACCTCGTCGCGCTCGACCTCGGGTTTAACAGAATCCGAGGCTACGCGCCCGCGAATCTCGCCTCGTTTCCCGCGCTGTCGTCCCTGTCCTTTCGCTACAACGCGCTACGTGGCGCGATCCCTCTGGAGTACGGCCACATCAAGTCCTTAAGGCGGCTCTTCCTCGACGGAAACTTCCTCAGCGGAAATCCGCCGGCGGGTCTTGTCGCCGCCGGCACGACGGTTTCCGGGAGCCTGGGGGATAATTGTCTGCAGGCGTGTCCCGGGTCGTCGCCGCTGTGCTCGCCGCCACAGAAAGCAATCTCCGTTTGCAAGCGAGCCTATGGTGGTAGACCAACACCGTAA 1188 0.5522 MQTFTFLYLTIISLSLILFHNTILVQALTSPLDIAALKAFKDSIKPSSIAPSSCLASWNFTTDPCSLPRRTTFICGLTCTTDSRRITQITLDPAGYSGTLTPLISRFSQLTTLDLSDNSFFGSIPSSISSLYNLQTLTLRSNFFSGPIPPSITTLKSLQSLDLSHNSLYGYLLNSMNSLTKLRRLDLSFNKLTGSIPKLPPNLLELAIKANYLYGPLQKQSFQGMNQLEVVELSDNKLSGTVESWLFSLPSLQQVNLSNNTFTAAQISGPRAADGGIGSRSNLVALDLGFNRIRGYAPANLASFPALSSLSFRYNALRGAIPLEYGHIKSLRRLFLDGNFLSGNPPAGLVAAGTTVSGSLGDNCLQACPGSSPLCSPPQKAISVCKRAYGGRPTP* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g00592 395 Gene3D Ribonuclease Inhibitor 270 380 IPR032675 -
Phac7g00592 395 SMART LRR_typ_2 249 272 IPR003591 -
Phac7g00592 395 SMART LRR_typ_2 155 178 IPR003591 -
Phac7g00592 395 SMART LRR_typ_2 107 131 IPR003591 -
Phac7g00592 395 SMART LRR_typ_2 328 351 IPR003591 -
Phac7g00592 395 SMART LRR_typ_2 179 206 IPR003591 -
Phac7g00592 395 Gene3D Ribonuclease Inhibitor 32 199 IPR032675 -
Phac7g00592 395 Gene3D Ribonuclease Inhibitor 200 269 IPR032675 -
Phac7g00592 395 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 10 385 - -
Phac7g00592 395 FunFam Nuclear pore complex protein NUP107 31 198 - -
Phac7g00592 395 Pfam Leucine rich repeat 108 168 IPR001611 GO:0005515
Phac7g00592 395 Pfam Leucine rich repeat 201 260 IPR001611 GO:0005515
Phac7g00592 395 Pfam Leucine Rich repeat 179 194 IPR001611 GO:0005515
Phac7g00592 395 ProSiteProfiles Leucine-rich repeat profile. 181 203 IPR001611 GO:0005515
Phac7g00592 395 PRINTS Leucine-rich repeat signature 158 171 - -
Phac7g00592 395 PRINTS Leucine-rich repeat signature 179 192 - -
Phac7g00592 395 SUPERFAMILY L domain-like 104 366 - -
Phac7g00592 395 Pfam Leucine rich repeat N-terminal domain 33 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g00592 Phac-Chr7 3330178 3332204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g00592 99 379 Receptor kinase-like Gene Family AT3G05370 28.152 2.48e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g00592 - - gmx:100801713 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g00592 7 3330178 3332204 Phac7g00592 7 3330178 3332204 ECH