Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02872 ATGGCTAGTAGCAGTAAGAAGAGGAGCTCCGTTGCGGAGGAGCAAACCCTCGCCACCGACGATTCTCCCAAACCGCTCAACAAGAAATCTAAGAACACTGCCGCCTCCGGTGATGGCCAGCAAGAGCCTTCAGTCAAGCCAATGGAGAGGAAGAAGAAGCGCAAAGCCTTGGACAAAGGGCGGCGTCTTACGTCATCACAGCCGCAACCCGAGCCTGTAGCTTCCGAATCCAAACCAGTTCCAAGTACTGCCAGCGGCGCTCTCCCGGAGTTCCACATTGGTGTGTTCAAGGACCTGGCGGGGGCATCCGAGGCGGCGAGGGAAGCCGCTGCGAAACAAATGGTGACGGAGTTGAAGGCGGTTCAGGACGCCTATGATGCGCGTGAGGAGAAGGAGAATGACGAGGGAGGATTCAAGTTGGAAGCGGATAAAGACGATGGATTGGATAATTGTGCTCCGTCTGTGAGATACGCTGTTCGTAGGCTCATTCGCGGTGTTTCTTCGTCCAGAGAGTGTGCGCGACAAGGCTTCGCTTTAGGTTTAACTGTATTAGCTGGCACTCCTAACATTAAGATTGACTCATTCCTTAAACTTGTAGTCAATTTGCTGGAAGTAACTTCATCAATGAAGGGCCAGGAAGCAAAAGATTGTCTATTGGGGCGCTTATTTGCTTATGGTGCACTGGCTCGATCAGGAAGACTTACAAAGGAGTGGAATATAGATAAAAACACTCCTTACATAAGAGAATTTATCACTGTACTTATCTCTCTTGCAAATAAAAAGCGGTACTTGCAAGAGCCTGCTGTTTCAATAATATTGGACTTGGTTGAAAAGTTGCCCGTTGAAGCAGTGGTGAATCATGTTCTTGAAGCTCCAGGGCTACAGGAGTGGTTTGAAGCTGCTATTGAAGTAGGAAATCCTGATGCTTTGTTCCTTGCTTTAAAACTTAGAGAGAAGATTTCTATTGACAGCTCCAAATTTGGAAAGTTACTGCCAAATCCATTCAGCTCTAGCCAGCTTTTCTCTGCCGATCACTTGTCCTCCCTAAGTAATTGCTTGAAGGAATCAACATTTTGTCAACCTCGGGTTCATAGTGTCTGGCCAGTTTTGATAAATATTCTATTACCTAATACTATTTTGCAATTAGAAGATGCAGCATCAGCTTCAAATTCATTAAAGAAACACAAAAAGAGTCGAAAATCCAGCTCTTCTGATGAAGAGATTGCAAGGAATCTTCAGTCTTTTTGTGAAATTATTATTGAAGGATCCCTTCTCTTCTCATCTCATGACCGGAAGCACTTAGCTTTTGATATTCTGTTTCTTCTTCTCCAAAAGCTGCCTGCATCTTTACTTCCAGTTGTTCTGTCAAATAAAGTTGTTCAGTGCATGGTAGATGTACTATCAGCAAAAAACACGTGGCTGTATAAAGTAGCTCAGCACTTTCTTAAACAGTTGTCAGATTGGGTGGGGGATGACGATGTCAGAAGAGTTGCTGTTATAGTGGCTATTCAGAAGCACAGCAATGGAAAATTTGATCGCGTAACACGAACAAAACATGTTAAAGATTTTATGTCACAGTTCAAAACTGAACCTGGTTGCATGCTTTTTGTTCAGAACTTAATTAACCTGTTTGTGGATGAAGGTAATGCTGTGGAGGAACCTTCAGATCAGAGTCAAACCACAGATGAAAATTCTGAAATAGGATCTATTGAGGATAAGGATTCTCCCAGGACCAATGGGAATTCTGACTCTTTGAAGAGTTGGGTAATAGAATCCCTTCCCAGTATTTTAAAATTCTTGAAGCTAGATGATGAAGAGAAGTTCCGAGTACAGAAAGAAATCTTGAAGTTTCTGGCTGTTCAGGGTCTATTCACTGCTTCTCTTGGCTCTGAGGTAACTTCGTTTGAGTTACAGGAGAAATTCAGGTGGCCAAAATCCCCCACATCGAATTCTCTTTGCAAGATGTGTATAGACCAATTGCAATTGTTATTGGCAAATGCTCAGAAAGGGGAGGGCCCTCGTCCTATCGCTAATAGCACCGAGCCGAATGATCTTGGTTCATACTTCATGAAATTCTTTGGCACCTTTTGCAACATTCCTTCAGTTTCCCTCTTCCGGTCTTTAGATGATGTGGATCAAAAGGCAGTAAAAAATTTGCAGGCAGTGGAAGCTAGATTATCCAAAGAGGAAAGGAGCCATGATTGTAGCACCGCTGCTAATAGATTGCATGCACTGAGATACTTGCTCATCCAGCTGCTTCTGCTAGTACTTCTTTGTCCAGGGGAGTATTCGGAAGCTGCATCTGAACTTATTATTTGTTGTAAGAAGGCCTTTTCTGGTTCTGATCTTCCTGAGTCCTCTGTAGAAGAAGATGTGGAGTCTGATGATGCTCCTGAATTGATGGACGTTCTTGTGGATACATTACTCTCTCTGCTTCCACAATCATCACCTCCTATGCGATCTTCCATAGAACAGGTATTTAAATATTTTTGTGGTGATATCACTGATGATGGACTGATGCAAATGTTGCGGGTCATTAAGAAACAGTTAAAGCCTGCTAGACATCCAGATACAGCAAGTGCAGATGATGATGAGGATGATGATGACTTCATCAATATTGAAGATGAAATTGATCAAGCTGAGACAGGTGAAACAGGTGAGAGTGATGGGCAGACAGATGACTCTGAGTCAGTAGTTGAGGTGGACGAAGCTGATCATGACCATTCTGAAGCTTCTGATGATGATTCTGATAGTGGGATGGATGATGATGCTATGTTCAGGATTGATACATATCTTGCCCAGATGTTTAAAGAAAAGAAAAATCAAGCAGGAGGAGAAACCGCCCATTCCCAGCTTGTGTTGTTCAAACTTCGAATCCTTTCATTGTTGGAAATTTTCCTTCATGAAAATCCAGGTAAGCCTCAGGTTCTTTTGGTCTACTCAAATTTGGCTCAGGCCTTCGTTAACCCTCACACAGCTGAAGTTAGTGAGCAGCTTGGACAGCGTATATGGGGAATATTACAAAAGCAAATATTTAAAGCAAAGGATTATCCTAAAGGTGATGGAGTCCATTTGTCCACTCTTGAATCTCTGTTAGAAAAAAGTCTGAAACTGGCTTCAAAACCATTTAAAAGACAGAAGTCTGCATCAAAGCAATCAGCTGCCTTGAACAGACAAAAAATGGTTTCGTCTCTTGCCCAAACCTCGACCTTCTGGATTTTGAAAATTATTGATTCAAGGAATTTCTCTCAGTCTGAATTGGAGAGGATTATTCAAATTTTCCGCGACGTACTGGTGGGGTATTTTGAAAGTAAGAAATCTCAAATCAAATCTGGATTTTTGAAAGAAATATTTCGAAGACGACCATGGATTGGACATGGTGTATTTGGCTTTATTTTGGAGAGGTGTGGAAGTGCGAAGTCAGATTTTCGACGAGTGGAGGCTCTTGATTTAGTAATGGAAATAATGAAGTCACTGACATCAGGCAACAGTGATGAGCAGAATGCATCGAAGAAGATTCTTAAGAACAGTTTGGATAAACTATCGCGTCTAATGAAAGAATTAGCGACTAATGTGCCAAGTAAACCGGCAAGGCGAACAGAGGTACACAAGTTTTATGTAAAGGCTTTGGAGATGTTGTCTAAGCATAACCTCACCAAACATTTTCTTAAAGCTTTGGCACCTGATACCGAAGCTGCGCTTGAGGCTCAACTTGGTGACCAGTTCATTACTTTGAAGAAGTTGGAAAAGTAA 3753 0.4239 MASSSKKRSSVAEEQTLATDDSPKPLNKKSKNTAASGDGQQEPSVKPMERKKKRKALDKGRRLTSSQPQPEPVASESKPVPSTASGALPEFHIGVFKDLAGASEAAREAAAKQMVTELKAVQDAYDAREEKENDEGGFKLEADKDDGLDNCAPSVRYAVRRLIRGVSSSRECARQGFALGLTVLAGTPNIKIDSFLKLVVNLLEVTSSMKGQEAKDCLLGRLFAYGALARSGRLTKEWNIDKNTPYIREFITVLISLANKKRYLQEPAVSIILDLVEKLPVEAVVNHVLEAPGLQEWFEAAIEVGNPDALFLALKLREKISIDSSKFGKLLPNPFSSSQLFSADHLSSLSNCLKESTFCQPRVHSVWPVLINILLPNTILQLEDAASASNSLKKHKKSRKSSSSDEEIARNLQSFCEIIIEGSLLFSSHDRKHLAFDILFLLLQKLPASLLPVVLSNKVVQCMVDVLSAKNTWLYKVAQHFLKQLSDWVGDDDVRRVAVIVAIQKHSNGKFDRVTRTKHVKDFMSQFKTEPGCMLFVQNLINLFVDEGNAVEEPSDQSQTTDENSEIGSIEDKDSPRTNGNSDSLKSWVIESLPSILKFLKLDDEEKFRVQKEILKFLAVQGLFTASLGSEVTSFELQEKFRWPKSPTSNSLCKMCIDQLQLLLANAQKGEGPRPIANSTEPNDLGSYFMKFFGTFCNIPSVSLFRSLDDVDQKAVKNLQAVEARLSKEERSHDCSTAANRLHALRYLLIQLLLLVLLCPGEYSEAASELIICCKKAFSGSDLPESSVEEDVESDDAPELMDVLVDTLLSLLPQSSPPMRSSIEQVFKYFCGDITDDGLMQMLRVIKKQLKPARHPDTASADDDEDDDDFINIEDEIDQAETGETGESDGQTDDSESVVEVDEADHDHSEASDDDSDSGMDDDAMFRIDTYLAQMFKEKKNQAGGETAHSQLVLFKLRILSLLEIFLHENPGKPQVLLVYSNLAQAFVNPHTAEVSEQLGQRIWGILQKQIFKAKDYPKGDGVHLSTLESLLEKSLKLASKPFKRQKSASKQSAALNRQKMVSSLAQTSTFWILKIIDSRNFSQSELERIIQIFRDVLVGYFESKKSQIKSGFLKEIFRRRPWIGHGVFGFILERCGSAKSDFRRVEALDLVMEIMKSLTSGNSDEQNASKKILKNSLDKLSRLMKELATNVPSKPARRTEVHKFYVKALEMLSKHNLTKHFLKALAPDTEAALEAQLGDQFITLKKLEK* 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02872 1250 Coils Coil 1171 1191 - -
Phac6g02872 1250 MobiDBLite consensus disorder prediction 877 921 - -
Phac6g02872 1250 MobiDBLite consensus disorder prediction 552 584 - -
Phac6g02872 1250 MobiDBLite consensus disorder prediction 877 900 - -
Phac6g02872 1250 MobiDBLite consensus disorder prediction 1 86 - -
Phac6g02872 1250 PANTHER MYB-BINDING PROTEIN 1A FAMILY MEMBER 76 1247 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Phac6g02872 1250 Pfam DNA polymerase phi 157 967 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Phac6g02872 1250 SUPERFAMILY ARM repeat 129 494 IPR016024 -
Phac6g02872 1250 MobiDBLite consensus disorder prediction 62 82 - -
Phac6g02872 1250 MobiDBLite consensus disorder prediction 1 40 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02872 K02331 - gmx:100787296 2029.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02872 6 25472426 25480417 Phac6g02872 6 25472426 25480417 ECH