Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02869 ATGGCTTCCGCCGTCTTAGCTAACCGGAACGAACCTAATTGGCCGCAGCATAGAGTCGGTGGAGCTGGATTCATGGGAAAAGCACCCTTCGCTAACCCTAACCCTAATTCTAATCCTAAATTAGCAAATAGCAAAAGGAATCAATCGGCTTCGGACGATGCTTCCTCTATCAACAGGCGATCCAACGAAGTAGTAACTCACTCCCAATACGTGTCCTTCAACATCGGATCCTTATCGAAGAAGGAACTCGGCGACATCAAGAATAGGCTTGCGGCGGAGCTCGAACAGGTTCAGAAATTCAGAACTCGAATCGAGTCAGGGGAGTTGCAACCTGGGCAGAGTTTTAATGGCGGCCACCCGAAGAAATCATCGAGCAAAAAGGTGTCCGGTAACAAACGACCCCTGCCGTTGAATTCCGCGAAGGATTTTAAACGGTCGCATTCGGAAGTTGGGAACTTGATGAAGGGCTGCTCGCAGGTTTTGCAGAAGCTGATGAAACACAAACATGGGTGGATCTTCAATGTACCAGTTGACGCTGTCGGAATGGGTCTCCATGATTACTACGATATAATTAAACAGCCTATGGATCTTGGAACGGTGAAGTCCAATCTCTCCAAAAACAAGTACTCGACCCCTTCGGATTTCGCCTCTGATGTGAGGTTAACTTTCAAGAATGCACTGACTTATAACCCTAAGGGTCACGATGTGTACACCATGGCGGAGCAGCTTTTGACGAGGTTTGAGGAACTGTATCGCCCGATGCATGAGAAATTCGAAGATTTGGTTGGACACGATCGTGATTTTGAGGAGGAATTGCAGGCCAGTTCGTGGAGCCACGTTGAGCCAGAGAGGGTGAAGAAGAAGGAGAATCTGATCCCTCATGCGAAATTTCAACAAGAGCCTCCGCAGCCTCCTGCAAGTTCTTCTAACCCTCCTTTGCTGCAGTCCCCCGTGCGCACACCTTCTCCCATGCGAGCCCCACCCGTTAAGCCTTTGAAGCAACCTAAGCCGAAGGCTAAGGATCCCAACAAGAGGGAGATGAGTCTTGAAGAGAAACACAAGCTTGGGTTAGGACTGCAGAGTTTGCCAGCAGAGAAAATGGAACAGGTGGTGCAGATCATAAGGAGGAGGAACGGGCATTTGAAGCAGGATGGTGATGAGATCGAGCTAGATATTGAGGCTGTTGACACAGAGACCCTTTGGGAACTTGATCGGTTGGTGACTAATTATAAGAAGATGGTTAGCAAGATTAAGAGGCAGGCATTGATGGGCAACAACAATGTGGCGCCACACAAAGCCAATATGGAATTGCCTGCCGGTGAGAAGGCTGATGGGATGCCAACTGAGTTGAAGAAGCCAAAGAAAGTGGAAGCAGGAGATGAGGATGTTGACATTGGGGATGAGATGCCAATGAGTATGTTCCCGCCTGTGGAGATTGAGAAAGATAAAGATGTTGCTGGTGGCCATGCAACTAGTAGTTCTAGTAGCTCTAGCGGTTCAAGCAGTGATTCCTCATCGTCAAGTGATTCGGATTCCGGGAGTTCCTCAGGAAGTGACTCTGAAGCAGACAATGGGCATTCGTAG 1584 0.4874 MASAVLANRNEPNWPQHRVGGAGFMGKAPFANPNPNSNPKLANSKRNQSASDDASSINRRSNEVVTHSQYVSFNIGSLSKKELGDIKNRLAAELEQVQKFRTRIESGELQPGQSFNGGHPKKSSSKKVSGNKRPLPLNSAKDFKRSHSEVGNLMKGCSQVLQKLMKHKHGWIFNVPVDAVGMGLHDYYDIIKQPMDLGTVKSNLSKNKYSTPSDFASDVRLTFKNALTYNPKGHDVYTMAEQLLTRFEELYRPMHEKFEDLVGHDRDFEEELQASSWSHVEPERVKKKENLIPHAKFQQEPPQPPASSSNPPLLQSPVRTPSPMRAPPVKPLKQPKPKAKDPNKREMSLEEKHKLGLGLQSLPAEKMEQVVQIIRRRNGHLKQDGDEIELDIEAVDTETLWELDRLVTNYKKMVSKIKRQALMGNNNVAPHKANMELPAGEKADGMPTELKKPKKVEAGDEDVDIGDEMPMSMFPPVEIEKDKDVAGGHATSSSSSSSGSSSDSSSSSDSDSGSSSGSDSEADNGHS* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02869 527 ProSiteProfiles NET domain profile. 337 418 IPR027353 -
Phac6g02869 527 MobiDBLite consensus disorder prediction 31 63 - -
Phac6g02869 527 MobiDBLite consensus disorder prediction 107 132 - -
Phac6g02869 527 MobiDBLite consensus disorder prediction 298 333 - -
Phac6g02869 527 Gene3D - 340 416 IPR038336 -
Phac6g02869 527 SMART bromo_6 146 256 IPR001487 GO:0005515
Phac6g02869 527 MobiDBLite consensus disorder prediction 488 527 - -
Phac6g02869 527 MobiDBLite consensus disorder prediction 438 527 - -
Phac6g02869 527 Pfam Bromodomain extra-terminal - transcription regulation 346 408 IPR027353 -
Phac6g02869 527 Pfam Bromodomain 157 241 IPR001487 GO:0005515
Phac6g02869 527 ProSiteProfiles Bromodomain profile. 165 237 IPR001487 GO:0005515
Phac6g02869 527 MobiDBLite consensus disorder prediction 297 348 - -
Phac6g02869 527 CDD Bromo_plant1 153 251 IPR037377 -
Phac6g02869 527 PANTHER OSJNBA0053K19.4 PROTEIN 60 520 - -
Phac6g02869 527 MobiDBLite consensus disorder prediction 445 461 - -
Phac6g02869 527 MobiDBLite consensus disorder prediction 1 63 - -
Phac6g02869 527 PRINTS Bromodomain signature 168 181 IPR001487 GO:0005515
Phac6g02869 527 PRINTS Bromodomain signature 218 237 IPR001487 GO:0005515
Phac6g02869 527 PRINTS Bromodomain signature 184 200 IPR001487 GO:0005515
Phac6g02869 527 PRINTS Bromodomain signature 200 218 IPR001487 GO:0005515
Phac6g02869 527 SUPERFAMILY Bromodomain 148 261 IPR036427 GO:0005515
Phac6g02869 527 Gene3D - 118 269 IPR036427 GO:0005515
Phac6g02869 527 MobiDBLite consensus disorder prediction 334 348 - -
Phac6g02869 527 MobiDBLite consensus disorder prediction 104 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02869 Phac-Chr6 25457343 25461385 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02869 - - vun:114187668 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02869 6 25457343 25461385 Phac6g02869 6 25457343 25461385 ECH