Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02351 ATGCAGCGTGTTAGATTTTCATCTCAACAGGCACCAGTACACAAGCTAGGGGATCCTCAAATGACATTATCCCCTAAGTTTAGGTTAGCGGCGGTCCAATCTTCTTTGGCAAATCCATCACCCGAGTTAGAGCTTTCTCTGAGAGAGGAACCCTTAATTCCTAGCCTTCCTGATGATGTTGCTCTCAATTGTCTTCTCCGAATTCCAGTTCAAAGTCACTCATCTTGTAGAGCTGTCTGCAAGAGGTGGCATATGCTACTTGGTAACAAAGAGAGGTTTTTCACCAACAAGAAGCAATTTGGTTTGAAAGACCCTTGGCTTTTTGTATTTGCCTACCATAAGTGCACTGGGAAGATCCAATGCCAGGTCCTTGACCTCACACACTTTTCTTGGCATACTATCCCTACAATGCCTTGTAGAGACAGGGTTTACCCTCATGGTTTTAGGTGTGTTTCGATCCCCCGTGATGGCACGCTGTATGTTTGTGGTGGCATGGTCTCTGATGTGGATTGCCCTCTTGACTTGGTGTTGAAATATGAGATGCATAAGAATAGGTGGAGTGTGAAGAATAGGATGATCACTGCTAGGTCCTTTTTTGCTAGTGGAGTGATCGATGGGATGATTTATATAGCTGGGGGAAATAGTACTGATCTTCATGAGCTAGATTCTGCTGAGGTGATGGATCCTCTCAGTGGGAGTTGGCGCCCTATTGCCAACATGGGAACAAATATGGCATCTTATGACGCTGCTGTTCTCAATGAGAAACTTCTTGTGACTGAAGGGTGGTTGTGGCCTTTTTATGTCTCTCCAAGGGGCCAGGTCTATGATCCTAGAACTAATAAATGGGAAAATATGGCTGTTGGACTCAGAGAAGGGTGGACAGGCTCCAGTGTCGTTGTTTACGGCCACTTGTTTGTTGTTTCTGAGCTTGAAAGAATGAAGCTAAAGGTATATGAACCTGAAACCGATTCCTGGGAAGCCATAGAAGGTTCTCCTCTGCCTGAGCAAATATGCAAGCCATTTGCTGTGAGTTCTTGTGATTGTCATATTTATGTTGTGGGTCGAAATCTTCTGGTTGTTGTTGGCCATATCTCTAGACTGAAACCAAAAGAAAGTTGTAAGGAAAAATGGAACTTCAGTGTTCGATGGCATGTAATTAATGCGCCAGAATATTTGTCTGATCTGACTCCTTCAAGCTCTCATCTGCTGTTTGCTTAG 1218 0.4417 MQRVRFSSQQAPVHKLGDPQMTLSPKFRLAAVQSSLANPSPELELSLREEPLIPSLPDDVALNCLLRIPVQSHSSCRAVCKRWHMLLGNKERFFTNKKQFGLKDPWLFVFAYHKCTGKIQCQVLDLTHFSWHTIPTMPCRDRVYPHGFRCVSIPRDGTLYVCGGMVSDVDCPLDLVLKYEMHKNRWSVKNRMITARSFFASGVIDGMIYIAGGNSTDLHELDSAEVMDPLSGSWRPIANMGTNMASYDAAVLNEKLLVTEGWLWPFYVSPRGQVYDPRTNKWENMAVGLREGWTGSSVVVYGHLFVVSELERMKLKVYEPETDSWEAIEGSPLPEQICKPFAVSSCDCHIYVVGRNLLVVVGHISRLKPKESCKEKWNFSVRWHVINAPEYLSDLTPSSSHLLFA* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02351 405 Pfam F-box domain 54 90 IPR001810 GO:0005515
Phac6g02351 405 SUPERFAMILY F-box domain 51 93 IPR036047 GO:0005515
Phac6g02351 405 PANTHER OS02G0202900 PROTEIN 1 399 IPR045887 -
Phac6g02351 405 SUPERFAMILY Kelch motif 104 356 IPR015915 GO:0005515
Phac6g02351 405 SMART fbox_2 56 96 IPR001810 GO:0005515
Phac6g02351 405 CDD F-box_AtAFR-like 52 93 - -
Phac6g02351 405 SMART kelc_smart 158 206 IPR006652 GO:0005515
Phac6g02351 405 SMART kelc_smart 207 254 IPR006652 GO:0005515
Phac6g02351 405 Gene3D - 51 98 - -
Phac6g02351 405 Gene3D - 99 378 IPR015915 GO:0005515
Phac6g02351 405 Pfam Kelch motif 195 241 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02351 Phac-Chr6 22464986 22467265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02351 53 294 EF-hand Containing Proteins AT4G39560 24.904 4.53e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02351 - - gmx:100791329 768.074