Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g02130 ATGGCCGAGGCTACACAGTCTAATGCTGAATTGTTGGAGTGGCCAAAGAAAGATAAGCGCCGCTTCCTGCATGCTGTGTACCGTGTTGGTGATCTTGATCGCACCATTAAGTTTTACACTGAATGTTTCGGGATGAAGCTTTTGAGGAAAAGAGATGTTCCAGAAGAGAAATTTTCCAATGCTTTTCTTGGATATGGTCCCGAGCAATCCCATTTTGTTGTGGAATTGACTTATAATTATGGGGTCACCTCATATGATATTGGAACTGGCTTTGGACATTTTGCTATTGCAACTCCAGATGTTCACAAATTGGTTGAAGACATCCGGGCCAAGGGTGGAACTATCACTAGGGAGCCTGGTCCAGTTACGGGTGGGACATCTGTTATTGCCTTTGTGAAGGACCCTGACGGTTATGTTTTTGAGCTCATCCAAAGACCTTCAACCCCTGAGCCATTGTGTCACGTAATGCTTCGTGTTGGTGATTTAGAGCGCTCAATAAAATTTTATGAAAAGGCTTTGGGTTTTAGGGTCTTAAAGAGGGCTGATAGACCTCAACAAAAGTATACTATAGTCATGCTTGGGTACGCAGACGAGCAAGAGACAACTGCATTGGAGCTTACATACAACTATGGTGTTACTGAATACACCAAGGGAAATGCTTATGCACAGATTGCTATAGGTACAGACGATGTATACAAGAGTGCTGAGGTTGTGAACATAGTCACACAAGAGCTTGGAGGGAAGATTACTCGGCAACCAGGGCCAATTCCTGGCCTTAACACAAAGATCACTTCTTTCTTAGACCCCGATGGATGGAAAACTGTTTTGGTTGACAATCAAGATTTTCTGAAGGAACTGGAGTGA 864 0.4363 MAEATQSNAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKFSNAFLGYGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVHKLVEDIRAKGGTITREPGPVTGGTSVIAFVKDPDGYVFELIQRPSTPEPLCHVMLRVGDLERSIKFYEKALGFRVLKRADRPQQKYTIVMLGYADEQETTALELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVNIVTQELGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNQDFLKELE* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g02130 287 Gene3D - 1 147 IPR029068 -
Phac6g02130 287 ProSitePatterns Glyoxalase I signature 1. 154 175 IPR018146 GO:0004462|GO:0046872
Phac6g02130 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 151 279 IPR037523 -
Phac6g02130 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 20 149 IPR029068 -
Phac6g02130 287 Gene3D - 148 287 IPR029068 -
Phac6g02130 287 ProSitePatterns Glyoxalase I signature 2. 88 100 IPR018146 GO:0004462|GO:0046872
Phac6g02130 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 23 142 IPR004360 -
Phac6g02130 287 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 273 IPR004360 -
Phac6g02130 287 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 21 145 IPR037523 -
Phac6g02130 287 FunFam Lactoylglutathione lyase 148 287 - -
Phac6g02130 287 PANTHER LACTOYLGLUTATHIONE LYASE 4 287 - -
Phac6g02130 287 NCBIfam lactoylglutathione lyase 22 146 IPR004361 GO:0004462|GO:0046872
Phac6g02130 287 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 152 279 IPR029068 -
Phac6g02130 287 CDD GlxI_Ni 23 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g02130 Phac-Chr6 21018130 21022188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac6g02130 154 278 Calmodulin-binding Proteins AT1G08110 28.000 1.45e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g02130 K01759 - gmx:100799447 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g02130 6 21018130 21022188 Phac6g02130 6 21018130 21022188 ECH
Phac6g02130 6 21018130 21022188 Phac3g01167 3 11564996 11567694 ECH
Phac3g01167 3 11564996 11567694 Phac6g02130 6 21018130 21022188 PCT