Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g01734 ATGGTGAAGGTGCGCATGAACACCGCCGATGTCGCCGCCGAGGTTAAATGCCTCCGACGCCTCATCGGAATGCGGTGCTCCAACGTCTATGATCTCTCTCCCAAGACCTACGTGTTCAAGCTGATGAACAGCAGTGGAGTTTCGGAATCCGGGGAGAGCGAGAAGGTTCTCCTGCTCATGGAGAGTGGCGTGAGATTGCACTCTACTATTTACATGCGTGACAAGAGCAACACGCCTTCTGGCTTCACTCTCAAATTGAGGAAGCATATTCGGACAAGGAGGCTCGAGGATGTGCGCCAACTTGGGTACGATCGGATTATCCTCTTCCAATTTGGAGTTGGGGAGAATGCAAACTATGTTATACTGGAGCTGTATGCCCAGGGGAATATCCTCCTCACAGATTCTAATTTTACCGTCATGACTCTGCTGCGGTCTCACAGGGATGATGATAAAGGGCTTGCAATTATGTCACGTCATCGATATCCTGTTGAAAGTTGTAGAGTTTTTGAGAGAACTACTATTGAAAAGTTGCAGGCATCTCTGATGTCTTCCAAGGAAGATGATAATGATGGGACTGTTAAGGTCAATGGAAATGGAAGTAATGCTTCTAATGTAGGAAAAGAGAAGCAGGGAACCCAAAAAGGTGGGAAGTCGTCAACACTGAAAGTTGTCCTTGGGGAGGCACTTGGTTATGGACCTGCACTTTCTGAACATATAATATTAGATGCTGGCCTAATCCCTAGTACTAAAGTTCCCAAAGAGAAAACGTGGGATAATGCTACTATTGAAGCTTTGGTTCAAGCTGTTGTGAAGTTTGAAGATTGGATGCAGGATATTATTTCTGGTGAAGTAGTCCCTGAAGGCTACATTTTGATGCAGAACAGAAGTTTGGGGAACAATTCTTCAATATCTCAGCCTGGAAGTGTTAGCCAGATGTATGATGAGTTCTGCCCCATCTTACTCAACCAATTTAAGTCAAGGGATTATACAAAATTTGAGACATTTGATGCAGCCTTGGATGAGTTCTACAGCAAAATTGAGAGTCAAAGATCTGAACAGCAGCAGAAAGCCAAAGAAAACACAGCTGCTCAGAAACTTAATAAGATTCGCCAGGATCAGGAAAATCGAGTACATGCTTTGAGGAAGGAAGCTGATCAATGTGTTAAGATGGCAGAATTGATAGAATACAACTTGGAAGATGTGGATGCTGCTATAGTAGCTGTTCGTGTAGCTCTAGCTAAAGGTATGAACTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGAAACCCAGTAGCTGGCCTCATCGACAAGCTCCATCTTGAGAGGAACTGCATGACTTTATTGTTAAGCAACAATCTTGATGAGATGGATGATGATGAGAAGACACTCCCTGTGGATAAGGTCGAAGTTGATTTAGCTCTTTCAGCCCATGCCAATGCTCGGAGGTGGTATGAACAGAAGAAAAAGCAGGAGAGCAAACAGGAAAAAACTGTAACCGCCCATGAAAAGGCTTTTAAAGCTGCAGAAAGAAAGACTCGCCAACAGCTTAATCAGGAAAAAACTGTTGCCTCAATTTCACATATGCGTAAAGTCCACTGGTTTGAGAAATTTAATTGGTTCATTACCAGTGAGAACTATTTGGTTATCAGTGGACGTGATGCACAGCAAAATGAGCTGATAGTGAAGCGGTATATGTCAAAAGGAGACCTATATGTACATGCTGATCTGCATGGAGCTTCTAGTACTGTTATCAAGAATCACAAGCCTGTGCAGCCAGTTCCACCACTGACCCTAAACCAAGCAGGATGTTTCACAGTCTGCCATAGCCAGGCATGGGATTCAAAAATTGTTACTAGTGCCTGGTGGGTTTATCCTCATCAGGTTAGTAAAACAGCTCCTACAGGTGAGTATCTGACAGTAGGGAGTTTCATGATCCGGGGAAAGAAAAATTTTCTTCCCCCACACCCTCTTATCATGGGTTTTGGCCTTCTATTTCGCTTGGATGAGAGTTCCTTAGGATCACATTTAAATGAACGAAGAGTAAGAGGAGAGGAAGAAGCAACAGATGATTTTGAAGAAAATGCTCCTCTTGAAGACAGATCTGATTCAGAGTCTGAGAAGGATGTCACTGATATAAAATCTGTCGCTGACTCAGAAATGAATGGTAAATTATCAGCAGATTCACACAAGCCCCTGTCTGAAGATTTTCCCGAAGATTCATCTCAAACAGGTTTAGCTTCTATCAGTGCCAAAAAGGAAATTTCACATGATTTTCCTGTGAAAGAAACAAGTACATCAAATATGGTTGATAGGGAGATATTATCAGACATTAGCAGAGACGGCTTAGTGGCTGTCACCCCTCAACTTGAGGAACTTATTGACCAAGCTCTGGAACTTGGATCTGTTGCTAAATCAAGTAAGATTTATGGAACTGAGAACTCCTCTCAAATTGATCTAGGCGGTGACAAACATTCTGAACAAAGCAAAGCGGCAGTTAGGGATAAACCTTATATATCAAAAGCTGAGAGACGAAAGCTTAAAAGGGAACAGAAACACGAAGATTCAGATTCAAATGTTGGACATGGAAAGGATGAACTGAAACTGAAAGATATTTCTGAAAATCTACCAGCAAAAGAAGATCAAAATGTAAAAAAAGGTGGTGGTCAAAAAATCAGCCGAGGGCAGAAGGGTAAACTTAAAAAGATAAAGGAGAAGTATGCTGGCCAGGACGAGGGAGAAAGGAACATTCGAATGGCATTGTTGGCTTCTTCTGGAAAATCAATCAAGAAGGAAGAGACGTCATCTGAAAATGATGCATTGGACACAGGGGAGATATCTGGCAATGGTCCTGTTGAAGCACCAAAAATATGTTATAAGTGTAAGAAGGCAGGTCACTTGTCTCGGGATTGTAAGGAAAAATCAGATGATCAGGCGCATAGGCATGCAATTCGTGAAGCTGAAGAAAATTCAAAAATAACTGATCTTGACACTTCCCAAGCAGACAGGGTGACAATGGAAGAAGATGATATTCATGAAATAGGAGAAGAAGAAAAAGAAAAACTAAATGACGTGGATTACTTGACTGGGAATCCACTTCCTAATGACATTCTCTTGTATGCTGTTCCTGTCTGTGGTCCTTACAGTGCACTTCAGTCTTACAAATATCGGGTGAAGATAATTCCTGGACCAGCGAAGAAAGGGAAAGCTGCGAAAACTGCAATGAACTTGTTCAGCCACGTGTCAGAAGCAACAACCCGGGAGAAGGAGTTGATGAAGGCCTGTACAGATCCTGAGCTAGTTGCTGCAATTATTGGTAATGTGAAAATATCAGCAGCCGGCCTTACTCAATTGAAGCAAAAGCAAAAGAAAGGCAAGAAGAGCAGCAAACAAGCTAGTTAG 3411 0.4257 MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLSPKTYVFKLMNSSGVSESGESEKVLLLMESGVRLHSTIYMRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIILFQFGVGENANYVILELYAQGNILLTDSNFTVMTLLRSHRDDDKGLAIMSRHRYPVESCRVFERTTIEKLQASLMSSKEDDNDGTVKVNGNGSNASNVGKEKQGTQKGGKSSTLKVVLGEALGYGPALSEHIILDAGLIPSTKVPKEKTWDNATIEALVQAVVKFEDWMQDIISGEVVPEGYILMQNRSLGNNSSISQPGSVSQMYDEFCPILLNQFKSRDYTKFETFDAALDEFYSKIESQRSEQQQKAKENTAAQKLNKIRQDQENRVHALRKEADQCVKMAELIEYNLEDVDAAIVAVRVALAKGMNWDDLARMVKEEKKAGNPVAGLIDKLHLERNCMTLLLSNNLDEMDDDEKTLPVDKVEVDLALSAHANARRWYEQKKKQESKQEKTVTAHEKAFKAAERKTRQQLNQEKTVASISHMRKVHWFEKFNWFITSENYLVISGRDAQQNELIVKRYMSKGDLYVHADLHGASSTVIKNHKPVQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEEATDDFEENAPLEDRSDSESEKDVTDIKSVADSEMNGKLSADSHKPLSEDFPEDSSQTGLASISAKKEISHDFPVKETSTSNMVDREILSDISRDGLVAVTPQLEELIDQALELGSVAKSSKIYGTENSSQIDLGGDKHSEQSKAAVRDKPYISKAERRKLKREQKHEDSDSNVGHGKDELKLKDISENLPAKEDQNVKKGGGQKISRGQKGKLKKIKEKYAGQDEGERNIRMALLASSGKSIKKEETSSENDALDTGEISGNGPVEAPKICYKCKKAGHLSRDCKEKSDDQAHRHAIREAEENSKITDLDTSQADRVTMEEDDIHEIGEEEKEKLNDVDYLTGNPLPNDILLYAVPVCGPYSALQSYKYRVKIIPGPAKKGKAAKTAMNLFSHVSEATTREKELMKACTDPELVAAIIGNVKISAAGLTQLKQKQKKGKKSSKQAS* 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g01734 1136 MobiDBLite consensus disorder prediction 680 750 - -
Phac6g01734 1136 MobiDBLite consensus disorder prediction 972 1002 - -
Phac6g01734 1136 Coils Coil 363 383 - -
Phac6g01734 1136 SUPERFAMILY Retrovirus zinc finger-like domains 957 983 IPR036875 GO:0003676|GO:0008270
Phac6g01734 1136 MobiDBLite consensus disorder prediction 183 217 - -
Phac6g01734 1136 MobiDBLite consensus disorder prediction 929 952 - -
Phac6g01734 1136 FunFam nuclear export mediator factor Nemf 6 163 - -
Phac6g01734 1136 Pfam NFACT protein C-terminal domain 1021 1114 IPR021846 -
Phac6g01734 1136 SMART c2hcfinal6 960 976 IPR001878 GO:0003676|GO:0008270
Phac6g01734 1136 Gene3D - 956 1008 - -
Phac6g01734 1136 MobiDBLite consensus disorder prediction 702 718 - -
Phac6g01734 1136 MobiDBLite consensus disorder prediction 816 910 - -
Phac6g01734 1136 MobiDBLite consensus disorder prediction 193 217 - -
Phac6g01734 1136 ProSiteProfiles Zinc finger CCHC-type profile. 961 976 IPR001878 GO:0003676|GO:0008270
Phac6g01734 1136 Pfam NFACT protein RNA binding domain 540 651 IPR008532 -
Phac6g01734 1136 Gene3D ibrinogen binding protein from staphylococcus aureus domain 6 163 - -
Phac6g01734 1136 MobiDBLite consensus disorder prediction 826 890 - -
Phac6g01734 1136 Pfam Zinc knuckle 960 976 IPR001878 GO:0003676|GO:0008270
Phac6g01734 1136 Pfam NFACT N-terminal and middle domains 217 526 - -
Phac6g01734 1136 Pfam NFACT N-terminal and middle domains 10 180 - -
Phac6g01734 1136 PANTHER NUCLEAR EXPORT MEDIATOR FACTOR NEMF 1 1112 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g01734 K24971 - gmx:100807437 1912.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g01734 6 18502407 18513170 Phac6g01734 6 18502407 18513170 ECH