Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00763 ATGAAGCCACACAAACTTCCCACTCCGTCATTCTCACGTGCGCTCGCACGTGCCCTATCCCCCGCCACCACCACGCAATGTGATTCAGCGTTTCCTTTGAAGACGGTGACCACCGCGAACTTCGAACCGTCGCTGGCGGAGCTCCGGCGCCACGTCCGGTTGTCGGACTTCGTGGCCATCGACCTCGAGATGAGCGGCATCACCAGCGCTCCCTGGCGCGAGTCACTCGAGTTCGACCGCTCCGACGTGCGCTACCTCAAGGTTCGAGACTCTGCCACCAAGTTCGCCGTCGTTCAATTTGGCGTTTGCCCCTTCCGTTGGGATTCCTCTAACAACTCCTTCGTCGCGTATCCGCACAGCTTCTATGTTTTTCCTCGACAGGAGCATGCAGGTCTGGGTCCGTGCGATGAATTTCTCTGGCAGACTACTTCGATGGATTTCTTGGCCAAATACCAGTTTGATTTTAATGCTTGCATACACGAAGGAATATCTTATTTATCCAGAGAACAAGAAAGGAAAGCATTAAGGAGTTTGAATTCTACATATGATAGTGAGTGGTCTGACATTTGTAAATTAAAAGATGTTAGGGACATGCCGTTGCGCAGTGCAGCAGACATTTTGTTTACTGCACGAATGAAAAACAAATTCCGTGAATGGCGTGATGGGTTATTACATGAGCAAAATCTAGAAGACCAAATTCAAGGAGTTACCGGAGACTCAAAATTTCAGGAGATATTTTTTGAGATGCATCCTGCTCTTAGGCTTAATGGATTCACCTCTCACCAGCTTAAATTGATTCAGTTGGTCATCAGAAAACACTTCAAAGATCTTTCTTATGTCAGTGTGAATAGCGAGGCTTCCAATTTACAGCAATTAGTTGTGTATACAGACTCAAAGGATGAATTAAACTCACTTCTGAAAAAAGTGAAAGAAGAAAATCACGGGGCAGAAAAGATGAAAATCCAAGCTGCTGTGGGACTTCGCCATGTTATTGATGTCCTTTCCTCGGAGCAGAAGTTGATTGTTGGTCACAATTGTTTTCTAGATCTTGCTCATGTCTACAGCAAATTTATAGGCCCCCTTCCTGATACTGCTGAAGAGTTTGTTACCTCTGTTAACAAGTGCTTTCCGCACATTGTTGACACCAAGATACTTCTTAACACTAATTTTATGCTCCAAGAAAAAATGAAAAGATCCAGAAAATCACTGGCAGCTGCATTCTCGTCATTTTGCCCACAAATTGCAGCTGGCTCCACAAGCAGTTATCCAGGTTCACTCTCACATGTGAAAGTGGAAGTTGAAGTTGATGATGTGAGATCATCCAGCTGGAACCCTGGAGGCAAGCACGAGGCAGGATATGATGCCTTCATGACTGGATGCATCTTTGCCCAGTTATGCAGTGATTTAGGTATCGATTACAAACTCCACGATTCTTTAAAACAATTAGCCCTTGATGAGAAACTGCAGAATTATGTTAATCGTCTATATCTTAGTTGGATGCATGGGGACATTATTGATCTAAGTACTGGTAATAAGGTTGCAGATTCTTCACCCAGCTATAGCCTCAAGAAGCGGTACCCAAAAATTTTGTTTGAAAACATTGTTATTATTTGGGGATTTCCTTCTACGCTGAAGGCAAATGAAGTAAGAGAGTGCATATCTAAAGTATTTGGACCAACTTCTGTAGTTTCTGTATTCCACTTGGATGCAACTGCAGTATTCGTTCAGTTTAGCAAAACAGAACTAGTTTCTGATTTTCTTTCATTGAAGAACACCTTAGAGAGAAGTGATGGTGCACTCTTGGTTTTTCATCCACTGTCAAAACTTTTGGAAGGTGGAAATACGTGTGCTGCTAATTATGGTACTTATAAAGAAATTTGTGGTTCACCCTTATCAGAATGCCTGTTTGCTGATCAGGTAAAAGCAGTTGGTATAATGTGGAAGACCAAATTGCCAGAATACAAGATAGCATTGGGGGCCGAAGAACATGAAAATCCAAGTGTAGGTAATATAAATATTGCTATGGAGACTGTCAAAATGACCAAGCCAAACACAATTGATCAATTGAGAAATGCTCCATTTCGGAGACAAGTCTCCACACATGAGGTTGAAGATTCTTGTGTTGCAGAAGCCAACTTGTGA 2142 0.4304 MKPHKLPTPSFSRALARALSPATTTQCDSAFPLKTVTTANFEPSLAELRRHVRLSDFVAIDLEMSGITSAPWRESLEFDRSDVRYLKVRDSATKFAVVQFGVCPFRWDSSNNSFVAYPHSFYVFPRQEHAGLGPCDEFLWQTTSMDFLAKYQFDFNACIHEGISYLSREQERKALRSLNSTYDSEWSDICKLKDVRDMPLRSAADILFTARMKNKFREWRDGLLHEQNLEDQIQGVTGDSKFQEIFFEMHPALRLNGFTSHQLKLIQLVIRKHFKDLSYVSVNSEASNLQQLVVYTDSKDELNSLLKKVKEENHGAEKMKIQAAVGLRHVIDVLSSEQKLIVGHNCFLDLAHVYSKFIGPLPDTAEEFVTSVNKCFPHIVDTKILLNTNFMLQEKMKRSRKSLAAAFSSFCPQIAAGSTSSYPGSLSHVKVEVEVDDVRSSSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDYKLHDSLKQLALDEKLQNYVNRLYLSWMHGDIIDLSTGNKVADSSPSYSLKKRYPKILFENIVIIWGFPSTLKANEVRECISKVFGPTSVVSVFHLDATAVFVQFSKTELVSDFLSLKNTLERSDGALLVFHPLSKLLEGGNTCAANYGTYKEICGSPLSECLFADQVKAVGIMWKTKLPEYKIALGAEEHENPSVGNINIAMETVKMTKPNTIDQLRNAPFRRQVSTHEVEDSCVAEANL* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00763 713 PANTHER POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 36 625 - -
Phac6g00763 713 Coils Coil 292 319 - -
Phac6g00763 713 Gene3D - 260 511 IPR036397 GO:0003676
Phac6g00763 713 Pfam CAF1 family ribonuclease 36 462 IPR006941 -
Phac6g00763 713 Gene3D - 35 193 IPR036397 GO:0003676
Phac6g00763 713 SUPERFAMILY Ribonuclease H-like 34 476 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00763 Phac-Chr6 12269519 12273588 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00763 K01148 - gmx:100808217 1175.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g00763 6 12269519 12273588 Phac6g00763 6 12269519 12273588 ECH