Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac6g00647 ATGGGACACTCTATTATTTTCTCTTTGTTGTGCCTTCTGTTGGTTTCGACATGTGGTTATGTGCAACCCCTTGAAGAGGGTTTCATCTCTGGGGTCATATCTGACAAGGGTCTTGAATATGCCAAGGAGTTGCTGATAGAGAAGGGTATTGCTTCCATTGTTATGCTTCAGCTGCCAGAGATTGACAATTCTGCCCAAGTTCCTCTTGTTGGAAATGCTAAAGTGATTCTTTCAGACATCACAATTACGGATGTTCAAGTCAATTCTTCATCTGTTAAGACGGGAGAGAATGGAATTGTTCTTGTTGTTTCAGGTGCCATTGTTGATTTAAGTATGAGGTGGAGGTACACTGTCAGCTCTTGGTTAATTCCAATTGGAATTTCGGATAAAGGAACTGCTTCAGTGAAGGTTACAGGTATGCAAGTGGGGCTTACCATAAATTTAAGGAACCAAGAAGGAACTCTGAGGTTGTCTCTCTTAGATTATGGATGTCATGTGGGAGACTTGTCTATAAAGTTAGACGGAGGTGCATCTTGGCTTTACCAACTGCTAGTAGATGCTTTTGAAGGGAATATAGCATCTGCCGTTGAAGAGGGCATTTCAGAGAAAATAAAAGAAGGGATAGTGAAGCTTGACAATTTTTTGGAATCTCTTCCAAAGAAGATCTCACTAGACAATTCTTCTACACTAAATGTTTCTTTTGTTGGCAATCCTGTGATGAGCAGTTCCTCCATTGCAATTGCAATTAATGGTTTATTCACAGGGAAAAAAGAAGTTTTACTACCTCAAGGTTACCACCACAAAAAATTGAAGATTTCTTCTGCCTGTGGTGGTTTACCAAAGATGATAAAATTATCAATACATGAAAGTGTGTTCAAATCTGCTTCCGAAGTTTACTTCAGTGCAGGTAAAATGCAATTGATTGTTGATAAACTGCCTGATCAGGCCATTTTGAACACTGCTGAATGGAGATTCATAGTTCCCCAATTATACAGGAGATATCCAAATGATGACATGCAGCTTAATATCTCTATATCTTCTCCACCAGTTATACAAGTGACATATCAAGATGTTGGTGCAACTATTCTAGTAGATATAACAATTGATGTTCTGGAAGATTTTGAAGTCATACCTGTTGCATGCATCTCAGTGGAAATTAGTGCTTCATGTGCTGTAGAAATTGTAGGAAATGACATTGTTGGTAGGCTCACATTACAGGAATTTTCTACATACTTGAAATGGAGCAAAATAGGGAAATTGCACATGCTTCTGATTCAGTCGCTAATGTCAAGTGTCCTCAAAACTGTTGTCATTCCATACTTGAACTTCAAATTAAAGAGAGGGTTCCCATTACCAATTATTGATGGTTATGGCTTTCAGAATGCTAAAATCTTGTACAACCATCCATGGATTGCAGTGTGTAGTGATGTTTCTTTAGAAGATTACTATTTAGATCCACAATCAACTTTAGCTTATGTTTCATAA 1485 0.3805 MGHSIIFSLLCLLLVSTCGYVQPLEEGFISGVISDKGLEYAKELLIEKGIASIVMLQLPEIDNSAQVPLVGNAKVILSDITITDVQVNSSSVKTGENGIVLVVSGAIVDLSMRWRYTVSSWLIPIGISDKGTASVKVTGMQVGLTINLRNQEGTLRLSLLDYGCHVGDLSIKLDGGASWLYQLLVDAFEGNIASAVEEGISEKIKEGIVKLDNFLESLPKKISLDNSSTLNVSFVGNPVMSSSSIAIAINGLFTGKKEVLLPQGYHHKKLKISSACGGLPKMIKLSIHESVFKSASEVYFSAGKMQLIVDKLPDQAILNTAEWRFIVPQLYRRYPNDDMQLNISISSPPVIQVTYQDVGATILVDITIDVLEDFEVIPVACISVEISASCAVEIVGNDIVGRLTLQEFSTYLKWSKIGKLHMLLIQSLMSSVLKTVVIPYLNFKLKRGFPLPIIDGYGFQNAKILYNHPWIAVCSDVSLEDYYLDPQSTLAYVS* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac6g00647 494 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 245 479 IPR017943 GO:0008289
Phac6g00647 494 Gene3D - 36 216 - -
Phac6g00647 494 Pfam LBP / BPI / CETP family, N-terminal domain 37 209 IPR017942 GO:0008289
Phac6g00647 494 PIRSF Lipid_binding_protein 6 482 IPR030675 GO:0005615|GO:0008289
Phac6g00647 494 SMART bpi2_2 277 475 IPR001124 GO:0008289
Phac6g00647 494 Gene3D - 32 465 - -
Phac6g00647 494 PANTHER OS06G0309200 PROTEIN 6 482 IPR045897 -
Phac6g00647 494 SMART bpi1_3 33 258 IPR017942 GO:0008289
Phac6g00647 494 Pfam LBP / BPI / CETP family, C-terminal domain 280 466 IPR001124 GO:0008289
Phac6g00647 494 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 241 IPR017943 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac6g00647 Phac-Chr6 11425132 11433019 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac6g00647 K05399 - gmx:100815362 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac6g00647 6 11425132 11433019 Phac6g00647 6 11425132 11433019 ECH