Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02392 ATGCTATGCTGGGAATATCTTGCAGATCCTAATGCACCAATGAGGTACAAAGGACTTTACCATCTGTTCTACCAATACAATCCAAAAGGTGCTGTTTGGGGCAATATTGTGTGGGCCCACTCAGTATCAAAGGATCTAGTGAATTGGACTCCACTAGATCATGCCATATACCCTTCTCAGCAGTCTGATATCAACGGTTGTTGGTCAGGCTCAGCCACTATCCTTCATGGGGGCAAACCAGCCATTTTATACACAGGAATTGACCCTAACAATCACCAAGTTCAAAACTTAGCCATACCCAAAAACTTCTCTGACCCATTACTCAGGGAATGGGTTAAGTCACCCAAAAATCCACTAATGGCCCCAACTGAAGCTAACCAGATCAATTCTAGCTCATTTAGGGACCCCACCACTGCTTGGCTAGGCAAAGATGGGTACTGGAGGGTGGTGATTGGAAGCAAAGTACACAGAAGGGGTGTGGCAATTTTGTACAGGAGCAAGAACTTTGTTAATTGGGTCCAAGCAGAACACCCCCTTCATTCAGCAGAAGGCACTGGAATGTGGGAGTGCCCTGATTTCTATCCAGTTCTGAACAAGAGCCCATTAACTACTGGCCTTGACACATCAGTGAATGGTGATAATGTTAGGCATGTGCTCAAGGTTAGCTTGGATGATACCAAACATGATCATTATCTGATTGGGACTTATGACCACACCAAGGATATCTTCACTCCGGATACAGGATTTGAGGATAGTCAACACGTTTTGAGACACGACTATGGAAAATATTATGCCTCAAAAACCATTTTTGAAGATGGAAAGAACAGAAGGGTCTTATTCGGTTGGGTTAACGAATCCTCAAGTGTTGCTGATGATATCAAAAAAGGATGGTCCGGAATCCATACTATTCCAAGGACCATTTGGCTTCATAAATCGGGGAAACAGCTGGTGCAATGGCCGGTGGTTGAAATTGAAAGCTTGCGTGAGAACCCTGTCCACTGGCCCTCCAAAGTGGTCAATGGTGGTGAAATTCTTCAAGTCACTGGTGTTACTGCCACACAGGCTGACGTTGAAGTTTCATTTGAAGTGAATAAGATTGGAAAGGCCGAAGTATTGGACCATTGGGAAGATCCTCAAATTCTGTGTGGTCGAAAGGGTGCAGCTGTAAAAGGTGGTTTGGGACCCTTTGGTTTGTTAGTTTTTGCTTCTCGTGGCTTGCAAGAGTATACAGCAGTGTTCTTTAGAATATTCAGATACCAAAATAAAAATTTGGTTCTCATGTGTAGCGACCAAAGCAGGTCTTCTTTGAATAAGGATAACGACAAGACAACCTATGGAACTTTTGTGAACGTGGACCCTCTTCGTGAGAAGCTCTCTCTAAGAACTTTGATTGATCATTCCATAGTAGAAAGTTTTGAAGGAGAAGGGAGGGCCTGCATCACAGCAAGAGTGTATCCCACAATAGCAATCAATGACAAGGCACAGTTATATGCTTTCAACAATGGAACTGCCTCTGTCAAGATCACAAAATTGAGTGCTTGGAGCATGAAGAAGGCAAAAATCAACTGA 1569 0.4359 MLCWEYLADPNAPMRYKGLYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIYPSQQSDINGCWSGSATILHGGKPAILYTGIDPNNHQVQNLAIPKNFSDPLLREWVKSPKNPLMAPTEANQINSSSFRDPTTAWLGKDGYWRVVIGSKVHRRGVAILYRSKNFVNWVQAEHPLHSAEGTGMWECPDFYPVLNKSPLTTGLDTSVNGDNVRHVLKVSLDDTKHDHYLIGTYDHTKDIFTPDTGFEDSQHVLRHDYGKYYASKTIFEDGKNRRVLFGWVNESSSVADDIKKGWSGIHTIPRTIWLHKSGKQLVQWPVVEIESLRENPVHWPSKVVNGGEILQVTGVTATQADVEVSFEVNKIGKAEVLDHWEDPQILCGRKGAAVKGGLGPFGLLVFASRGLQEYTAVFFRIFRYQNKNLVLMCSDQSRSSLNKDNDKTTYGTFVNVDPLREKLSLRTLIDHSIVESFEGEGRACITARVYPTIAINDKAQLYAFNNGTASVKITKLSAWSMKKAKIN* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02392 522 SMART glyco_32 6 476 IPR001362 GO:0004553|GO:0005975
Phac5g02392 522 SUPERFAMILY Arabinanase/levansucrase/invertase 6 321 IPR023296 -
Phac5g02392 522 Gene3D Glycosyl hydrolase domain; family 43 5 330 IPR023296 -
Phac5g02392 522 Pfam Glycosyl hydrolases family 32 N-terminal domain 6 320 IPR013148 -
Phac5g02392 522 CDD GH32_Fruct1-like 6 309 - -
Phac5g02392 522 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 11 521 - -
Phac5g02392 522 SUPERFAMILY Concanavalin A-like lectins/glucanases 320 518 IPR013320 -
Phac5g02392 522 Gene3D - 331 516 - -
Phac5g02392 522 Pfam Glycosyl hydrolases family 32 C terminal 323 515 IPR013189 -
Phac5g02392 522 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 4 332 - -
Phac5g02392 522 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 332 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02392 Phac-Chr5 42380898 42383519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02392 14 522 Glycoside Hydrolase AT3G13790 63.056 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02392 K01193 - gmx:100776791 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02392 5 42380898 42383519 Phac10g01826 10 40834708 40847251 PCT