Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02221 ATGGCGGCTTCCACCACCAGCCAGGTCTACATCGATGTAATCGAGGATGTCATGGTCAAGGTCCGTGATGAGTTCGTCAACAACGGAGGTCCCGGAGAGGAAGTTCTCAAGGAGCTTCAAGCTATGTGGGAATCAAAGATGATGCAAGCTGGCGCTGTGCTGGGTCCCATAGAAAGGTCCGCTGCCGCTAAGCCAACTCCCAGCGGTCCTATTACTCCGGTTCATGATCTTAACATGCCGTATACAGAGGAGTATGAGACTCCTACTGCTGAAATGCTTTTCCCCCCTACGCCTTTGCAAACGCCAATTCAAACCCCTTTACCTGGAACTGGGGATAACTCAACATATAACATTCCTACGGGACCAAGTGACTATCCCTCTTCCGGAAATGATAACGGAGGAAATGCTGATGGAAAAGGAGGAAGACCTGCTCCGTATATGCAACCTCCTTCTCCTTGGATGAACCCAAGGCCCCCACTTGATGTCAATGTTGCTTATGTGGAAGGGCGGGATGAGGCAGACCGAGGAACTTCTAATCAACCTCTGACACAGGACTTCTTCACTATGTCATCAGGAAAGAGAAAACGCAATGATTTGACTTCTCAATATAATTCTGGTGGATATATACCTCAGCAAGATGGGGCTGGGGATGCTGCACTTGGAGTTTTTGAAATTGAGGTAAATGGGGGAGACATCTCCATTAATTCACATCACACAATTTCCAAAGCGAAAGTGCCAGCAGATTTGGAGAGGTTGACTTCTAGAATTCCTCAACTTGATGGACCAATTCCTTATGAGGATGATGCGCTTTCTACTCCAAATGTGAGTAGTGATATTTGTCCTGTCTCCGTCCTGCTTTCATGA 864 0.4745 MAASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERSAAAKPTPSGPITPVHDLNMPYTEEYETPTAEMLFPPTPLQTPIQTPLPGTGDNSTYNIPTGPSDYPSSGNDNGGNADGKGGRPAPYMQPPSPWMNPRPPLDVNVAYVEGRDEADRGTSNQPLTQDFFTMSSGKRKRNDLTSQYNSGGYIPQQDGAGDAALGVFEIEVNGGDISINSHHTISKAKVPADLERLTSRIPQLDGPIPYEDDALSTPNVSSDICPVSVLLS* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02221 287 Gene3D - 1 55 - -
Phac5g02221 287 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 5 48 - -
Phac5g02221 287 SMART TFIIA_2 8 286 IPR004855 GO:0005672|GO:0006367
Phac5g02221 287 Pfam Transcription factor IIA, alpha/beta subunit 9 201 IPR004855 GO:0005672|GO:0006367
Phac5g02221 287 FunFam Transcription initiation factor IIA subunit 1 55 - -
Phac5g02221 287 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 1 1 273 IPR004855 GO:0005672|GO:0006367
Phac5g02221 287 MobiDBLite consensus disorder prediction 104 134 - -
Phac5g02221 287 MobiDBLite consensus disorder prediction 103 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02221 Phac-Chr5 41424918 41431813 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g02221 1 108 EF-hand Containing Proteins AT5G59230 39.815 5.45e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02221 K03122 - gmx:100820439 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02221 5 41424918 41431813 Phac5g02221 5 41424918 41431813 ECH
Phac3g03173 3 32567578 32569813 Phac5g02221 5 41424918 41431813 PCT