Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g02197 ATGGTGTTGCAGAAGAGGTTATATTATAGCTTTAATGGATATCAGGTGCCAACCAAGCGCCGAGCTACTAGATCAGCGAGGAGGAACGCTACATTTCAAAGAAGGTTGGAAGACAATCAAATGTGTGCATTTGACTTATTGGCCACCGTAGCTGACAATTTATTGCAAGAGAAACAGAATCCGACCACATATAGTGATAGGTCATTGGGAAAAGATAGGGATGGATTTGTAAAAGAGGAGTGCCAGAATGCAAATAAACCACTAAAAACTGAGCCTTCTGATGAAGCAAGTTGTGACAGAAGATGTCAGCATGAATTTGTTAAAGAAGGATGCACAGATGCAAATAAACCATTAAAACCTGAGCTTTCAGACGAAGGAAGTAGTGATAGAAAAGGTTTCTCTAATATTTCTTCCCAAGTATACAATCAAAATTGTTGTTTGAAGGAATTCCCCATTCATGAAATTGAAGGCCATTCATGCATTGCTTCTATAGTAACAAGTTCTAGTTGCTCAGAGAAGTTTGTTGCTGAAAAACTGGTGGATGGGAAAGGCCAAAATGGAACGGAAAATTTAGCTAGCAAAGTTGAATTAGGTTCCTCTGGAAGTCCAGAGAGTATTGGTTGCAAGTTAGACGGTGATGTAAGTAAAGTAAAAGATGTTAAGTTTGGGAAGGTTCCCATGGATACTGGAACTGGGTTGTGCTGTTCTGAGGATCCCTTGGATGAAAAACCTCCAGCACTGGTAAGTTCTTGTGGCAATGCCAAGTTGTCTGGGTATGATGACAGCATGCCTCATGGCTCATTGTCCAAAGGCTGTGACAATGTGCTAGTAGATAGTAGAGATGATGACGAAAACTTTTCTGGGTGTGCTCACCCTAGTAACAAAATAGAGTCCACTAGACCAATTACTTGTATAGATGATAGAAAAATAAAGAAAAGATTGGCTTCAAAATATCATAAAGCTGCTCAAGAATCCAGGCCTGATAAGTTATCTAATAGTGTTTTGGATGGAAATTTGAAGCCAGTTTACAGCAGTAGGAAGAACTACTATAAAAGCCAAAGATCTCAAATGAACATTCCTTTCAAAAAGAGGAAGCTTTTTAAATGTGGCTCTGATACAAATTCTAACGGATATATCAGAAGTGGTGACACTTATTTTTCACTCAAGAATGAAACAAATCAAAGTGTTTCATATTCATCTTCTGGAATGAGCAAAGATCATGGAACATCATCCTTGGGACACTCTGCATTACGATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTGCCCGAGCTTTTAATTGAGATTCCAGAAACTGCAACCATTGGGTCCTTAAAGAGGACAGTGATGGAGGCAGTGACTGCAGTGCTTGGAGGTGGATTACGTGTGGGAGTGATTCTCCATGGAAAGAAGGTTAGAGATGACAGTAAAACTCTACTCCAGACTGGAATTTCTCATGATAACCACTTGGATGCTTTGGGATTCGCCTTGGAGCCTAATTTTTCACAAAATCTACCAACTGCATGTGCAACTAGTTCTCTTCGCATTCCTAGTGCGGATATGCCTCAACCTTTTATAAGGTATCCTTCAAGTCCTGCTGTAATTCATCAAAGGATTCAGGGCTTTTCTAACACGTTAGGTGAGCATCAAGCAACAGGTTTAGGTAACCTTGTCGAAAGTGATCATGATTCAGCACCTTCTCCCATCAACACATCAGGTGAAAAAAAATTGTCAGATTCTAAAGAACTTATTACTGTTCCTGAAATGGGTATGGAGGCACTAGCCGTACTACCTGGGCATCAAAAGTCAAAGCGAACTGAGATTGCACAGCGCCGAATTCGTAGGCCTTTTTCCGTTGCTGAAGTGGAAGCATTGGTTCAAGCAGTTGAGAAACTTGGAACTGGAAGGTGGCGTGATGTTAAGCTTCGTGCTTTTGATAATGCAAAGCATCGAACATACGTGGATTTGAAGGATAAATGGAAAACACTGGTGCACACAGCAAGAATATCCCCTCAGCAAAGGAGGGGAGAGCCTGTTCCTCAAGAACTTTTGGATAGGGTCCTAACTGCCCACGCATATTGGTCCCAGCAGCAGACTAAGCAACAGCTCAAGCACCACTCAAAACCTTGCCTTCTCCTTTAA 2154 0.4104 MVLQKRLYYSFNGYQVPTKRRATRSARRNATFQRRLEDNQMCAFDLLATVADNLLQEKQNPTTYSDRSLGKDRDGFVKEECQNANKPLKTEPSDEASCDRRCQHEFVKEGCTDANKPLKPELSDEGSSDRKGFSNISSQVYNQNCCLKEFPIHEIEGHSCIASIVTSSSCSEKFVAEKLVDGKGQNGTENLASKVELGSSGSPESIGCKLDGDVSKVKDVKFGKVPMDTGTGLCCSEDPLDEKPPALVSSCGNAKLSGYDDSMPHGSLSKGCDNVLVDSRDDDENFSGCAHPSNKIESTRPITCIDDRKIKKRLASKYHKAAQESRPDKLSNSVLDGNLKPVYSSRKNYYKSQRSQMNIPFKKRKLFKCGSDTNSNGYIRSGDTYFSLKNETNQSVSYSSSGMSKDHGTSSLGHSALRSRDSHVKLRIKSFRVPELLIEIPETATIGSLKRTVMEAVTAVLGGGLRVGVILHGKKVRDDSKTLLQTGISHDNHLDALGFALEPNFSQNLPTACATSSLRIPSADMPQPFIRYPSSPAVIHQRIQGFSNTLGEHQATGLGNLVESDHDSAPSPINTSGEKKLSDSKELITVPEMGMEALAVLPGHQKSKRTEIAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQTKQQLKHHSKPCLLL* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g02197 717 CDD SANT_TRF 619 669 - -
Phac5g02197 717 Gene3D - 606 710 - -
Phac5g02197 717 FunFam Telomere repeat-binding protein 1 607 710 - -
Phac5g02197 717 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 710 IPR031105 -
Phac5g02197 717 SUPERFAMILY Ubiquitin-like 419 509 IPR029071 -
Phac5g02197 717 ProSiteProfiles Myb-like domain profile. 613 668 IPR001005 -
Phac5g02197 717 SUPERFAMILY Homeodomain-like 619 700 IPR009057 -
Phac5g02197 717 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 613 672 IPR017930 -
Phac5g02197 717 SMART sant 617 670 IPR001005 -
Phac5g02197 717 MobiDBLite consensus disorder prediction 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g02197 Phac-Chr5 41285709 41291689 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g02197 - - gmx:100780881 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g02197 5 41285709 41291689 Phac5g02197 5 41285709 41291689 ECH