Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01348 ATGTGGAGAGATCCGGGAGTTTCAGCCGATTCTTTCTATGAAATCCGCCCCGAATGTACCGATGTTCCCATTTCTCGATTTAAAATCAAGGCTGGTAAAACACTAAGTGCAAGAAAATGGCAAGCTGCATTTACTCGAGAAGGGTATCTAGATATAGGCAAGACTCTAAGCCGAATCTGCCGTGGGGGAGTCCATCCATCTATTAGGAGAGAAGTTTGGGAATTTCTACTTGGTTGCTATGATCCCAAGAGTACATTTGAGGAAAGAGATCAGATAAGACATCGCCGAAGAATGCAATATGCTACAATTAAAGAAGAATGCCGCCAATTGTTTCCTCTTGTTGGAAGTGGTAGATTTGTCACAGCACCTGTTGTTACTGAAGATGGTCTGCCAATTCAAGATCCATTGGTTCTGAAAGAAACAAATTCAGCCAAGGGATTGGTTGTACATAATCAAGATAATAATAATCATTCAAGAATGGTTGCTACAAATAGTTTAAAGAAGGTGACAGACAAGATAGTAGTCCAGTGGCTGTTAACTCTCCATCAAATAGGTCTTGATGTGGTTCGCACCGATAGGACATTAGTTTTTTATGAGAGGCAAGAAAACCTGTCAAAATTATGGGATGTTCTGTCTGTTTATGCCTGGATAGATAAAGATGTTGGCTATGGTCAAGGAATGTGTGACCTATGCTCCCCTATGATAATTCTTCTTGATGATGAAGCAGACGCATTTTGGTGCTTTGAGCGATTGATGCGCAGGCTTCGCGGCAATTTTAGATGCACCGAGAGCTCTGTTGGGGTGACATCACAACTAAGTGATTTGGCTTCAGTTACTCAAGTAATTGATCCAAAACTTCATAACCATTTAGAGCATCTTGGTGGAGGTGACTATCTGTTTGCTTTTCGAATGCTAATGGTTTTGTTTCGTCGAGAATTCTCTTTTTGTGATTCATTGTTTCTTTGGGAGATGATGTGGGCCTTGGAATATGATCCTGATTTGTTCTTGATGTATGAAATGCCTGAATCAGCTTCTGGACAAGCTGTGGGCTCAAAAGGGAAATCAAAATCAATACGTCAATGTGGAAAGTATGAGAGAGAATTTTTGAAGAGTGGATCAAAGAATGCTTCTGAAGCTCCTCTTCCTATATCTGTTTTCCTTGTTGCTAGTGTATTGAAAGATAAAAGTGCAAAACTACTCCAAGAAGCACGGGGTTTGGATGATGTTGTCAAGATTTTGAATGACATAACTGGGAATCTAGATGCCAAAAAAGCTTGCAGTGGGGCTATGAAACTTCACAAGAAATATTTAAAAAAGGCCAAGAAACACTAG 1332 0.4017 MWRDPGVSADSFYEIRPECTDVPISRFKIKAGKTLSARKWQAAFTREGYLDIGKTLSRICRGGVHPSIRREVWEFLLGCYDPKSTFEERDQIRHRRRMQYATIKEECRQLFPLVGSGRFVTAPVVTEDGLPIQDPLVLKETNSAKGLVVHNQDNNNHSRMVATNSLKKVTDKIVVQWLLTLHQIGLDVVRTDRTLVFYERQENLSKLWDVLSVYAWIDKDVGYGQGMCDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTESSVGVTSQLSDLASVTQVIDPKLHNHLEHLGGGDYLFAFRMLMVLFRREFSFCDSLFLWEMMWALEYDPDLFLMYEMPESASGQAVGSKGKSKSIRQCGKYEREFLKSGSKNASEAPLPISVFLVASVLKDKSAKLLQEARGLDDVVKILNDITGNLDAKKACSGAMKLHKKYLKKAKKH* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01348 443 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 38 289 IPR035969 -
Phac5g01348 443 FunFam TBC1 domain family member 15-like 161 259 - -
Phac5g01348 443 Gene3D - 265 443 - -
Phac5g01348 443 Pfam Rab-GTPase-TBC domain 155 327 IPR000195 -
Phac5g01348 443 ProSiteProfiles TBC/rab GAP domain profile. 63 329 IPR000195 -
Phac5g01348 443 SMART tbc_4 60 352 IPR000195 -
Phac5g01348 443 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 267 436 IPR035969 -
Phac5g01348 443 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 35 414 - -
Phac5g01348 443 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 152 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01348 Phac-Chr5 32368382 32377106 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01348 - - gmx:100805808 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01348 5 32368382 32377106 Phac5g01348 5 32368382 32377106 ECH