Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01337 ATGGAGTCAATACTGGGTCGGGCTCTGGAGTACACACTCAAGTACTGGCTCAAATCCTTCTCCCGAGAACAGTTCAAGTTGCAGGGCCGCACCGTTCACCTCTCCAATTTAGATATCGACGGCGACGCCTTGCATTCCAGTATCGGATTGCCGCCGGCGCTCAACGTTGCCTCCGCCAAAGTCGGCAAACTAGAGATAACACTTCCGTCTGTGAGCAATGTGCAAACGGAACCAATCATCGTGCATATTGATAGACTCGATCTGGTTCTCGAAGAGAATTCTGATTTTGATGCATCTCTTAGTTCGAACTGTTCCACGCCGTCGGCTGCCTCCGCCAAGGGAAGTGGTTACGGTTTCGCTGATAAGATTGCAGATGGCATGACTATACAAATTCAAACGGTTAATCTATTACTTGAAACTTGTGGTGGTTCTCGTCGCCAAGGGGGAGCAACATGGGCACCACCTATGGCATCTATCACCATACGCAACCTTTTGTTGTATACTACAAATGAAAACTGGCAGGTTGTAAATCTTAAGGAAGCGCGGGAATTCTCCAGTAACAAGAAGTATATATATGTCTTCAAAAAACTGGAATGGCAATCTTTGTCTATTGATCTTTTACCTCATCCCGACATGTTCACAGAAGCTACACTAGACCACTCTGAGGAGGGGTCAAACTTTAGAGATGATGATGGCGCAAAACGTGTATTCTTTGGAGGAGAGCGTTTTATAGAAGGAATATCAGGAGAAGCATATATCACAATTCAGAGAACTGAGTTGAATAGTCCGCTCGGGCTTGAAGTTCAATTGCACATCAATGAAGCTGTTTGCCCTGCATTAAGTGAACCAGGACTACGTGCACTTCTCCGCTTTATGACAGGAGTATATGTTTGCCTAAACAGGGGTGATGTTGATTCCAAGCGATCCACTGAAGCAGCTGGGCGTTCTCTTGTCTCAATTGTCGTAGATCATATATTTCTTTGTATTAAAGATACTGAATTCCAGCTTGAGCTTTTGATGCAGTCCCTCTTTTTTTCTCGGGCCAGTCTTTCTGAAGGAGATAATGATAATAACTTGACGAGAATTACAATTGGTGGCTTATTTTTAAGGGACACTTTTTGTAGTCCTCCATGTATCTTAGTGCAACCATCAATGCAAGCTGGCACTAGAGATGCTTTCCGTGTGCCAGAATTTGCCAGAAGCTTTTGCCCTCCAATATATCCTTTACAAGAACAACAGTGGCAATTGATTGAGGGAACCCCTCTAATATGCCTCCATGCTCTTAAGATCATGCCTTCTCCACTTCCACCATCCTTTGCTTCTGAAACTGTTATTGACTGTCAGCCTCTTGTGATTCATCTCCAGGAAGAATCATGTCTGAGGATATCCTCTTTCTTAGCTGATGGCATTGTTGTCAATCCTGGTGATATTTTACCAGATTTCTCGGTGAAATCTTTTATTTTCAATCTCAAGGGACTGGATCTTACAGTTCCTTTTGAGAAGACCAAATTGGATAGTTCCAAAAATGACATGGACAATGCAGTCCAGACCTCCTTTTCTGGAGCAAGACTTCATATTGAAAGCCTTTTCTTTTTAAATTCGCCCTCACTGAAACTGAGAATGCTGAACCTGGAGAAGGATCCTGCTTGCTTCAGTCTTTGGGAAGGTCAACCAATTGATGCTAGTCAGGAGAAATGGACTGCTAGAGCATCTCAGCTTACCTTGTCTCTGGAAGCAAGCATTGACGGACCTGGATGTCAAAATTCTCTTGGACAGACGGCAGGATTGTGGAGATGTGTTGATCTGAAAGATGCTTGCATTGAAGTGGCTATGGCAACTGCTGATGGCAGTCCATTGTTACAAGTTCCCCCACCTGGGGGTATTGTCAGGGTTGGAGTTGCTTGTGAACAGTATCTGTCCAACACTTCTATTGAACAATTGTTTTTTGTCCTGGATCTATATGGTTATTTTGGGAGTGTTAGTGAAAAGATAGCAATGGCTGGAAAAAGGAAACAATTGGAGGACATTAGGGACAAATCCTTTGGTGGAAAGCTGATGGACAAGGTTCCTAGTGATGCTGCTGTCAGTTTATCGGTGAAAAATCTCCAACTTCGATTTCTGGAGTCATCTTCTGTTAACATTGAGGGGATGCCTTTAGTGCAGTTTCTTGGAGATGATCTATTTACGAGTGCCACTCATAGAACCCTTGGAGGAGCTATTATTGTTTCATCTATTTTACGATGGGAGAGTGTTGAGATAAGTTGTGTAGATGCTGAGGGGCTCTTGCCATGTGAAAAGACCTCTTTCTTATGTTCTAAGGATAATGCTCCCTCAATGAGTGATAATGGATATCCTCAGCTAAGAACTGTTTTTTGGGTGCATAAGAACGAGAAACATCTATCGAATGGAAGTGCTCATTCATTTCCTTTTCTAGATATAAACATGGAGCATGTAATACCATTATATGACCAAGACTTGGAATCTCATAGTTTAAATGTCTCAGCTTCTGTATCTGGTGTTCGCCTTGGTGGTGGAATGAACTATGCTGAAGCACTCCTGCATAGGTTTGGAATACTTGGGCCTGATGGAGCTCCTGGAATGGGTCTTTGTAAAGGGTTGGAAAACTTACAGAAAGGACCATTGTCAAAACTTTTTAAGGCAACTCCTCTCATTGTTAATGATTCAGAAGATGTTAGAAGTATGATAGAAGGGAATGAAGCCACTTTTCCCCAATTGAAGAAGCCTGATGATGTGGATGTAACTGTAGAATTGAGAGACTGGTTATTTGCCCTTGAAGATACACAAGAGACAGCTGAAAGATGGTGGTTCTCCAGCCATGAAGATGAAGACAGAGAAGAGAGGAGTTGGCATGCATCTTTCCATGGTTTACGATTAAATGCAAAAAGTAGCCCACCAAATGTTCCAGATGGAAAAGTACAAGTGCAAAGAATAAAACAACATCCAGTAGAACTGATTACGGTCGGAGTTCAAGGTCTGCAGATCTTGAAGCCTCATTTACAAAAGGACTTCCCTTCATCAGTACTAATTGCAAATGGGGGTAAAGAATTCCCCGATGCAGTTGGAGGAATTGGTGTTGAAGTTCGCTTGATTTTAGGTGGGGAGAATGTCGATGATGAAATGGCTAATTGGGAAGTGGAAAACCTAAAATTCTCTGTCAAACAACCGATTGAGGCAGTTGTAACAAAGGACGAAGTTCAGCACCTTACTTTTCTGTGCAAATCTGAAATTGACTCAATTGGCCGGATAACTGCAGGAGTTATACGGTTGCTGAAGTTAGAAGGTTCTATTGGTCAGTCTGTTATAGATCAACTTGGGCACCTAGGAAGTGAAGGCATTGACAAGATTTTCTCTCCGGAAAAGGTTAGCAGAGACGGAAGTGTTTATAGTAGAGGAATTTCTCCTCTGCCAAATCTCATAAATGAGGAATCGCACACAAGTTCGGAACAAACATTAACTTTGCTTGAGGAAGCACTTGTGGAATCACAGGCTAAACTTGATGATTTAATCAGTGATATTGGTACTTCAGACTCTTCCTCTCAACACCTTACCATACTCCAACTGAGTCAAAAGATAGAGACTATGCATGACTTACTGATGCAATTACGGAATCAACTTTAA 3639 0.4246 MESILGRALEYTLKYWLKSFSREQFKLQGRTVHLSNLDIDGDALHSSIGLPPALNVASAKVGKLEITLPSVSNVQTEPIIVHIDRLDLVLEENSDFDASLSSNCSTPSAASAKGSGYGFADKIADGMTIQIQTVNLLLETCGGSRRQGGATWAPPMASITIRNLLLYTTNENWQVVNLKEAREFSSNKKYIYVFKKLEWQSLSIDLLPHPDMFTEATLDHSEEGSNFRDDDGAKRVFFGGERFIEGISGEAYITIQRTELNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGVYVCLNRGDVDSKRSTEAAGRSLVSIVVDHIFLCIKDTEFQLELLMQSLFFSRASLSEGDNDNNLTRITIGGLFLRDTFCSPPCILVQPSMQAGTRDAFRVPEFARSFCPPIYPLQEQQWQLIEGTPLICLHALKIMPSPLPPSFASETVIDCQPLVIHLQEESCLRISSFLADGIVVNPGDILPDFSVKSFIFNLKGLDLTVPFEKTKLDSSKNDMDNAVQTSFSGARLHIESLFFLNSPSLKLRMLNLEKDPACFSLWEGQPIDASQEKWTARASQLTLSLEASIDGPGCQNSLGQTAGLWRCVDLKDACIEVAMATADGSPLLQVPPPGGIVRVGVACEQYLSNTSIEQLFFVLDLYGYFGSVSEKIAMAGKRKQLEDIRDKSFGGKLMDKVPSDAAVSLSVKNLQLRFLESSSVNIEGMPLVQFLGDDLFTSATHRTLGGAIIVSSILRWESVEISCVDAEGLLPCEKTSFLCSKDNAPSMSDNGYPQLRTVFWVHKNEKHLSNGSAHSFPFLDINMEHVIPLYDQDLESHSLNVSASVSGVRLGGGMNYAEALLHRFGILGPDGAPGMGLCKGLENLQKGPLSKLFKATPLIVNDSEDVRSMIEGNEATFPQLKKPDDVDVTVELRDWLFALEDTQETAERWWFSSHEDEDREERSWHASFHGLRLNAKSSPPNVPDGKVQVQRIKQHPVELITVGVQGLQILKPHLQKDFPSSVLIANGGKEFPDAVGGIGVEVRLILGGENVDDEMANWEVENLKFSVKQPIEAVVTKDEVQHLTFLCKSEIDSIGRITAGVIRLLKLEGSIGQSVIDQLGHLGSEGIDKIFSPEKVSRDGSVYSRGISPLPNLINEESHTSSEQTLTLLEEALVESQAKLDDLISDIGTSDSSSQHLTILQLSQKIETMHDLLMQLRNQL* 1213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01337 1212 Coils Coil 1191 1211 - -
Phac5g01337 1212 PANTHER UNCHARACTERIZED 1 1210 IPR026728 -
Phac5g01337 1212 Pfam N-terminal region of Chorein or VPS13 1 98 IPR026854 -
Phac5g01337 1212 Coils Coil 1158 1178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01337 Phac-Chr5 31968358 31977496 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01337 - - gmx:100811661 2182.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01337 5 31968358 31977496 Phac5g01337 5 31968358 31977496 ECH