Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01311 ATGTCCCTTCCATCTTCAACTCTTGCATCTGAACTCAAGCGACCTTGCGTGAGTTATGCTCCAAACATATGGGGAGACACTTTCCTTCAATATGCTGCTCAATCCAAGGAAACCGATGACAATGTAAAGCAGCAAGCAGAAAAACTAAAAGAGGAGGTGAAATCAATATTTCAATCATCAATGAATCAAAACATTGTACAAAAATTAAACTTCATTGACTCAGTCCAACGTTTAGGCGTGTCATATCACTTTGAACAAGAAATTAACCAAGAGTTGGAACAAATTTACAACACTTACACAAAAAATACCTCTATCAATGAAGATGGTGATTATCACTTTATTGCTCTACTCTTTCGTTTGTTAAGGCAACAAGGTTATGGAATTTCATCAGATGTGTTTAACAAATTTAAAAATGGCCAAGGAAACTTCAATGAAACACTTGCCAACGATGTTCAAGGCTTGTGTAGTTTGTATGAAGCTTCACATCTAAGAATTCCTGGAGATGATGTGTTGGAAGAAGCATGTGACTTCTCAAATACTAAACTTAAGTCCTTGGTAAACAAACTAAGTCCATCTCTTGTTGCACAAATCAATCATTGCTTAAGGCGACCTCTTAACAAGAGTGTACCTAGGTTTGAGACAAAGGATTACATGACTCTCTTTGAACAAGATCCTTCCCATAACGAAACTCTGTTGATCTTTGCAAAAGTAGATTTCAACCTTCTTCAAAAGTTGCATAAAAAAGAAATAGGTCGTATCACTGAGTGGAAGAAAAACTCAAACTATGTGACTCGGGTCCGTTACGCAAGAGATAGGTCGGTTGAGAGCTATCTTTGGTCATTCGCAATATCCTACAAGCCTGAATACAGCAATGCAAGAACGTTTGTGGGAAAATTGATCCAATGTATCAGTCTTCTAGATGATACATATGATGCTTATGGCACATTTGAAGAACTTGAACTCTTCACAAAAGCAATTCAGAGATGGGATATTAGCCACATTCGATCTCTTCCTCAGGGTATGAAAGTAGTATTTGAAACAGTTCTACAACTGTGTGAAGAAATAGAGTTGCTGACAAGAGAGAATGGAAAATCAAGTTTTGTGGTGCCAAGTTTTAAACAAGCCATTTTTAACTTAACAAAAGGCTACATGGTTGAAGCCAAATGGTGTCATGAGGATTACATTCCAACATATGATGAGTATAAAGCAAATGGAGTCTTAACTTCTTGTTACCCTTGTATGATAACTTCGTTTATTAGCCTGATAGAAGTTGCAACAGAAAGTGTGATGGATTGGATTTTCAGTGATCCAAGTATCCTTGCAGCTGCATCAGTTATTGGGAGACTAATGGATGACATGGCCTCACACAAGTTTGAGCAAGAAAGAGTACATGTTGCATCAGCTGTGGAATGTTGCATGAAGCAATATAGCATTTCACAAGCAGAGGCTTATAACTTGATTCACAAGGATGTTGAAGATTATTGGAAGGTTATACATGAAGAGTATATGAAGTCAAGTAATATTCCAAAGTGTGTGCTGGATTGTATAGTTAATTTGGCAGGCATGTCTGAGGTTTCTTATGAAAATTATAAGGATAAATATACTAATGGAGAATGGCTAAAAGATTGTGTTTCTTCATTGCTTGTGGATCCCGTGTCCATCGATCAGGAGAAGTTATCTGCCATATAA 1689 0.3706 MSLPSSTLASELKRPCVSYAPNIWGDTFLQYAAQSKETDDNVKQQAEKLKEEVKSIFQSSMNQNIVQKLNFIDSVQRLGVSYHFEQEINQELEQIYNTYTKNTSINEDGDYHFIALLFRLLRQQGYGISSDVFNKFKNGQGNFNETLANDVQGLCSLYEASHLRIPGDDVLEEACDFSNTKLKSLVNKLSPSLVAQINHCLRRPLNKSVPRFETKDYMTLFEQDPSHNETLLIFAKVDFNLLQKLHKKEIGRITEWKKNSNYVTRVRYARDRSVESYLWSFAISYKPEYSNARTFVGKLIQCISLLDDTYDAYGTFEELELFTKAIQRWDISHIRSLPQGMKVVFETVLQLCEEIELLTRENGKSSFVVPSFKQAIFNLTKGYMVEAKWCHEDYIPTYDEYKANGVLTSCYPCMITSFISLIEVATESVMDWIFSDPSILAAASVIGRLMDDMASHKFEQERVHVASAVECCMKQYSISQAEAYNLIHKDVEDYWKVIHEEYMKSSNIPKCVLDCIVNLAGMSEVSYENYKDKYTNGEWLKDCVSSLLVDPVSIDQEKLSAI* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01311 562 Pfam Terpene synthase family, metal binding domain 232 496 IPR005630 GO:0000287|GO:0010333|GO:0016829
Phac5g01311 562 SFLD Isoprenoid Synthase Type I 227 553 - -
Phac5g01311 562 Gene3D Farnesyl Diphosphate Synthase 21 537 IPR008949 -
Phac5g01311 562 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 21 227 IPR008930 -
Phac5g01311 562 Coils Coil 32 52 - -
Phac5g01311 562 FunFam Isoprene synthase, chloroplastic 211 542 - -
Phac5g01311 562 FunFam Isoprene synthase, chloroplastic 63 227 - -
Phac5g01311 562 CDD Terpene_cyclase_plant_C1 14 551 IPR044814 GO:0010333|GO:0016102
Phac5g01311 562 Gene3D - 63 227 IPR036965 GO:0010333|GO:0016829
Phac5g01311 562 PANTHER OS04G0344100 PROTEIN-RELATED 12 552 - -
Phac5g01311 562 Pfam Terpene synthase, N-terminal domain 23 201 IPR001906 GO:0010333|GO:0016829
Phac5g01311 562 SFLD Terpene Cyclase Like 1 C Terminal Domain 227 553 IPR034741 -
Phac5g01311 562 SUPERFAMILY Terpenoid synthases 227 554 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01311 Phac-Chr5 31401823 31405665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01311 K15803 - gmx:100781367 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01311 5 31401823 31405665 Phac5g01311 5 31401823 31405665 ECH