Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01301 ATGTGTGATTGGGTTGGTTATTTGATTTGTGTTGGGTTTTGTAGCTCTGGAACATCAGGGGGTGAGAGAAAGTTGATGCCAACAATTGAGGAGGAGCTAGGGAGGAGGTGTGTGTTGTACAGTCTGTTGATGCCAATAATGAGCCAGTTTGTTGCAGACCTAGAAAAAGGAAAAGGAATGTATTTGATGTTCATAAAATGTGAGTCCAAAACACCTGGAGGAATAGTAGCTCGTCCAGTTCTCACTAGCTATTACAAGAGCCCCTACTTTAGGGATAGACCCTACGACCCTTACACAAACTACACAAGCCCAAATCAGACGGTCCTCTGTCCTGATTCCTACCAAAGCATGTACTCCCAACTCCTATGTGGTCTTTGCCAAAACAAAGAGGTTCTCAGAGTGGGGGCCATCTTTGCCTCTGGCTTCATTCGTGCCATTCGGTTCCTGGAGAAACACTGGACCCTCCTTTCCAATGATATCAGAACAGGAACTTTGAACCCTTTGATCACTGACACGTCAGTCAGAGAGGCTGTGATGAGGATCCTGAAGCCTGATCCCAAACTTGCTGATATGATTCACAAGGAGTGTAGCAAGGGGTCTTGGCAGGGGATTATTACCAGGCTTTGGCCCAATACAAAGTATGTGGATGTTATTGTGACTGGGACTATGGCACAATACATTCCCACTTTGGATTACTATAGCAATGGCCTCCCACTGGTGTGCACCATGTATGCTTCTAGTGAGTGTTACTTTGGGGTCAACCTCAACCCTCTTTGCAAACCTACCCAAGTGTCTTACACCCTCATCCCCACCATGTGCTACTATGAATTCCTACCCGTCAACCGAACCACTGACCTCACTCTACCTTCTAGAACAACACCAACATCTCTCAATCATACACAACACCAACAATTGATGGAGCTTGTTGATGTCAAGCTTGGTCAAGAATATGAGCTCGTTGTTACAACTCATGCTGGACTTTATAGGTATAGAGTAGGAGATATACTAAGAGTGACAGGATTCAAGAACAAGGCCCCACAATTTAGCTTTGTATGCAGAAAGAACGTTGTCCTGAGCATAGATTCTGACAAGACTGATGAGGTTGAGCTACAAAACGCAATGAAGAATGCAGTGACACACCTGGTGCCATTTGATGCACAGGTGAGTGAGTACACAAGCTATGCAGACACCACCACAATCCCGGGACACTATGTGTTGTATTGGGAGCTAAGCCTCAAAGGGTCAACTCCTATTCCACCCTGCGTGTATGAAGATTGTTGTCTAACAATTGAGGAGTCACTCAACAGTGTGTATCGCCAGGGTCGTGTCTCAGACAAATCAATAGGACCCCTTGAGATCAAGATTGTGGAACAGGGCACCTTTGACAAACTCATGGACTATGCCATTAGCTTAGGGGCATCAATAAACCAGTACAAGGCACCAAGGTGTGTCAAGTTTGCTCCTATAGTGGAATTGTTGAACTCAAGGGTAACATCCAACTATTTTAGTCCTAAGTGTCCTAAGTGGGTTCCGGGACACAAACAGTGGATTCATTGTAATTGA 1563 0.4523 MCDWVGYLICVGFCSSGTSGGERKLMPTIEEELGRRCVLYSLLMPIMSQFVADLEKGKGMYLMFIKCESKTPGGIVARPVLTSYYKSPYFRDRPYDPYTNYTSPNQTVLCPDSYQSMYSQLLCGLCQNKEVLRVGAIFASGFIRAIRFLEKHWTLLSNDIRTGTLNPLITDTSVREAVMRILKPDPKLADMIHKECSKGSWQGIITRLWPNTKYVDVIVTGTMAQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPTQVSYTLIPTMCYYEFLPVNRTTDLTLPSRTTPTSLNHTQHQQLMELVDVKLGQEYELVVTTHAGLYRYRVGDILRVTGFKNKAPQFSFVCRKNVVLSIDSDKTDEVELQNAMKNAVTHLVPFDAQVSEYTSYADTTTIPGHYVLYWELSLKGSTPIPPCVYEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKAPRCVKFAPIVELLNSRVTSNYFSPKCPKWVPGHKQWIHCN* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01301 520 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 13 506 IPR004993 -
Phac5g01301 520 Pfam GH3 auxin-responsive promoter 13 485 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01301 Phac-Chr5 30684864 30687783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01301 12 503 EF-hand Containing Proteins AT1G23160 50.598 2.23e-171 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01301 K14487 - gmx:100797120 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01301 5 30684864 30687783 Phac5g01301 5 30684864 30687783 ECH